Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3238 |
Symbol | |
ID | 5346934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3303929 |
End bp | 3304618 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640840729 |
Product | pseudouridine synthase |
Protein accession | YP_001376452 |
Protein GI | 152976935 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.643571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA ATCAATTTAT AAGTGAAGCC CTCTCTTGTT CAAGGCGAGA AACAGATCGT CTTATTAAAG CTGGGCGCGT TGCAATGAAT GATAAAGTTT GTACGCATGG TGTACTTGTA AAACCCGATG ATGTTGTCAC GGTTGATGGG AAAGTTATTG AAAAAGAAGA AAAAGAAAAA GTATATATAG CTTTCCATAA ACCAGTTGGC ATCACTTGCA CAGCTGCGAA ACATATCGAA GGGAATATTA TTGCTTATAT CAACTATCCC GAAAGAATCT TTCCAGTTGG CCGTTTAGAT AAAGCATCAG AAGGATTAAT TTTACTAACA AACGATGGGA AGATTGCCAA TCAAATTTTA CATGGAGATC ATGGACATGA GAAAGAATAT GTCGTAACTG TTGATAAGTC GTTTACGGAT GGGTTTATTC ATGGCATGAG TTGCGGTGTG AAAATTAAAG ATGGAATGAC AAAGCCTTGT AAAGTAACGC GAGTAGATGA CTCTACATTT CGCATCGTTT TAACACAAGG AATGAATCGA CAAATTCGGA GAATGAGCCG TGCTTTTGGT TATACAGTAA CAAAACTAAA GCGCGTTCGA ATTATGAATA TAAAATTAGG TGAGCTTGAG GTTGGAAAGT GGCGCTATCT TACCGATGAA GAGTTACAAG AGTTACGAGG AGCATTATAG
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Protein sequence | MKINQFISEA LSCSRRETDR LIKAGRVAMN DKVCTHGVLV KPDDVVTVDG KVIEKEEKEK VYIAFHKPVG ITCTAAKHIE GNIIAYINYP ERIFPVGRLD KASEGLILLT NDGKIANQIL HGDHGHEKEY VVTVDKSFTD GFIHGMSCGV KIKDGMTKPC KVTRVDDSTF RIVLTQGMNR QIRRMSRAFG YTVTKLKRVR IMNIKLGELE VGKWRYLTDE ELQELRGAL
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