Gene Bcer98_3216 details

Gene Information

• Locus tag: Bcer98_3216
• Symbol: sdhA
• ID: 5346029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: -
• Start bp: 3282472
• End bp: 3284265
• Gene Length: 1794 bp
• Protein Length: 597 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640840709
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_001376432
• Protein GI: 152976915
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGGA AACTTATAGT AGTCGGCGGT GGCTTGGCTG GCTTAATGGC AACGATTAAA 
GCGGCAGAAG CAGGAGTAAA CGTGGAATTG TTTTCTTTAG TACCAGTAAA ACGTTCGCAT 
TCTGTATGTG CCCAAGGTGG TATTAACGGT GCCGTAAATA CGAAAGGTGA AGGGGATTCT 
CCATGGATCC ACTTTGACGA TACAATTTAT GGTGGGGACT TTTTAGCGAA TCAACCACCA 
GTTAAAGCAA TGTGTGAAGC AGCACCTGGT ATTATTCATT TAATGGATCG CATGGGTGTT 
ATGTTCAACC GTACAGAAGA GGGACTTCTT GATTTCCGCC GTTTCGGTGG AACGCAACAT 
CATCGTACAG CATTCGCTGG TGCAACGACT GGTCAACAGT TATTGTACGC ATTAGATGAA 
CAAGTGCGTC GTCATGAAGT AGCAGGACTT GTAACGAAAT ATGAAGGTTG GGATTTCTTA 
CGAGCTGTTA TTGATGATGA AGGTGTATGC CGAGGAATCG TTGCACAAGA TTTACAATCT 
ATGGAGATTA AAAGTTTCCG AGCTGATGCC GTGATTATGG CAACAGGGGG CCCTGGTATC 
ATCTTCGGAA AATCTACAAA CTCTATTATT AATACAGGTA CAGCAGCATC AGTTATTTAT 
CAACAAGGTG CATATTATGC AAATGGTGAG TTCATTCAAA TTCATCCAAC AGCAATTCCT 
GGTGATGATA AATTACGCTT AATGAGTGAA TCTGCACGTG GTGAAGGTGG CCGTGTTTGG 
ACATATAAAG ACGGTAAACC GTGGTATTTC TTAGAAGAGA AATATCCTGC ATATGGAAAC 
CTTGTACCTC GTGATATCGC AACACGTGAA ATCTTTGACG TATGTGTGGA ACAAAAACTA 
GGTATTAATG GTGAAAATAT GGTATATCTA GATCTTTCTC ATAAAGACCC GAAAGAACTA 
GATATTAAAC TTGGTGGAAT TATTGAAATT TATGAGAAGT TTACAGGTGA TGACCCTCGT 
AAACTACCGA TGAAAATCTT CCCAGCTGTT CATTACTCAA TGGGTGGATT ATGGGTAGAT 
TATAAGCAAA TGACCAATAT TCCAGGTTTG TTTGCAGCAG GTGAGTGTGA TTATTCTATG 
CACGGAGCAA ACCGACTTGG AGCAAACTCT TTACTATCTG CAATTTATGG TGGTATGGTA 
GCCGGTCCAA GTGCAATTGA ATATATAAAA GGTCTAACAA AAGCATCGGA TACTGTTTCA 
TCAGCTGTCT ATGAACAAAA TGAATTGATC GAAACAGAGA AATTTAACAA TATTTTATCA 
TTAGATGGTA ATGAAAATGC TTACATTCTT CATAAAGAAC TTGGAGAATG GATGACGGAT 
AATGTAACGG TAGTTCGTGA AAATAAAAAA CTACTAGAAA CAGATGATAA AATTCAAGAG 
TTAATGGAGC GTTATAAACG CATTAACATT AACGATACAG CAAAATGGAG TAACCAAGGT 
GCTTCATTTA CACGTCAACT TGCAAATATG CTTCAATTAG CACGTGTTAT TACAATTGGG 
GCATATAACC GTAATGAAAG TCGGGGAGCA CATTATAAAC CAGAATTCCC AGAGCGTGAT 
GACGTGAACT TCTTGAAAAC AACAATGGCG AAATTTGATG GCGAAGGAAA TGCACCAGCA 
TTCCATTATG AAGATGTTGA TATTTCATTA ATCAAACCGC GTAAGCGTGA TTACACTTCA 
AAACATGAAG TAGCTTCTAA GGGTGAAGAG AAGGGGGATA AACAACATGC CTGA 

 

Protein sequence

MKGKLIVVGG GLAGLMATIK AAEAGVNVEL FSLVPVKRSH SVCAQGGING AVNTKGEGDS 
PWIHFDDTIY GGDFLANQPP VKAMCEAAPG IIHLMDRMGV MFNRTEEGLL DFRRFGGTQH 
HRTAFAGATT GQQLLYALDE QVRRHEVAGL VTKYEGWDFL RAVIDDEGVC RGIVAQDLQS 
MEIKSFRADA VIMATGGPGI IFGKSTNSII NTGTAASVIY QQGAYYANGE FIQIHPTAIP 
GDDKLRLMSE SARGEGGRVW TYKDGKPWYF LEEKYPAYGN LVPRDIATRE IFDVCVEQKL 
GINGENMVYL DLSHKDPKEL DIKLGGIIEI YEKFTGDDPR KLPMKIFPAV HYSMGGLWVD 
YKQMTNIPGL FAAGECDYSM HGANRLGANS LLSAIYGGMV AGPSAIEYIK GLTKASDTVS 
SAVYEQNELI ETEKFNNILS LDGNENAYIL HKELGEWMTD NVTVVRENKK LLETDDKIQE 
LMERYKRINI NDTAKWSNQG ASFTRQLANM LQLARVITIG AYNRNESRGA HYKPEFPERD 
DVNFLKTTMA KFDGEGNAPA FHYEDVDISL IKPRKRDYTS KHEVASKGEE KGDKQHA