Gene Bcer98_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3213 
Symbol 
ID5345970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3280370 
End bp3281149 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content37% 
IMG OID640840706 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_001376429 
Protein GI152976912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGTTTTTAT TTCTACCGCT ACCGCTATAA TCGGCATCAC ATCCTTCGCT 
TATTTCAGCT CTCACTCATT CATGCGAAAT GAAGTGAAAG CAGTCGATGA TCAAAAGCAT
GTGAAACATT CAAATGAAGA AATTCCTTCC TTTCCAAAAG CAGCTCATAC AGCTCAAAAA
ATAGATGATA CTTTTTCTCT CGTTACAAAC CCAGATTCAC CACTTGTCTT AGTGAATAAA
CATCGCAAAT TACCAGATGG CCATATACCG AAAGATTTAA TAAAACCAAA TGTTCCCTTT
ACCTCTCCTA AAGATAAAGA AAAAACATTA CTTCGTAAAA ATGCTGCCAT CGCCCTTGAG
AACATGTTCC AAGCTGCAAA AGAAGATGGA TTAGAACTAA TAGCTGTTTC AGGATATCGC
TCTTATAAAC GGCAACAATC TTTACATAAC ACATATATTA AACGCCAAGG AAAGGCTGAA
GCTGAAGCTG TTAGCGCAAT TCCTGGAACA AGCGAACATC AGACTGGGCT TGCAATGGAT
ATTAGTTCTA AATCAGCAAA ATACCAATTA GAACCTATTT TCGGAGATAC AAAAGAAGGG
AAATGGGTTG CAGCACACGC TCATAAATTC GGCTTTGTCA TTCGATACTT AGAAGATAAA
ACAGATATAA CCGGATACGC ATATGAGCCA TGGCATCTAC GCTATGTTGG GAATCCGTAT
GCTACATACT TATATAAACA CCACTTAACA TTAGAAGAAG CAATGGATGA TAAAAAATAA
 
Protein sequence
MKKIVFISTA TAIIGITSFA YFSSHSFMRN EVKAVDDQKH VKHSNEEIPS FPKAAHTAQK 
IDDTFSLVTN PDSPLVLVNK HRKLPDGHIP KDLIKPNVPF TSPKDKEKTL LRKNAAIALE
NMFQAAKEDG LELIAVSGYR SYKRQQSLHN TYIKRQGKAE AEAVSAIPGT SEHQTGLAMD
ISSKSAKYQL EPIFGDTKEG KWVAAHAHKF GFVIRYLEDK TDITGYAYEP WHLRYVGNPY
ATYLYKHHLT LEEAMDDKK