Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3179 |
Symbol | hemD |
ID | 5343447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3230883 |
End bp | 3231641 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640840672 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_001376397 |
Protein GI | 152976880 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCCC TTATTGGAAA AAAAGTACTC GTTACACGTG CCCGGCATCA AGCTGGGCAA ATGAGCGCAG CAGTAAGAAA AGAGAGCGGA ATTCCAATGG AAATTCCGCT TTTGCGTATG GATGGGGTAT CTCAAGAAAA GCTTCAAAGT GTAGCCAAAC AGTTGCATGT ATACGATTGG ATAATTTTTA CGAGCAAAAA TGGGGTAAGG TTCTTTTTGG AGGCAATCCA TCAGAAACTT CCGCCTGCTG TAAAAATTGC TGCAGTCGGT ATAAAAACAG CTCAAGAACT AGAAGCAAGA GGATATCAAG TTCATTTTGT TCCAACAGCG TTTGTTGCTG AAACGTTTGC GATGGAATTT GTGCAAACAT TAAATGGGAC AGAGCGTATT TTATTTCCAA AAGGGAATTT AGCAAGAGAT GTAATTTCAG TGAAGCTTCG TGAAGCTCAT ATACTTGTAG AAGAGTTGGT TGTCTATGAG ACGAAACTAA ATGATGAGAA AAAAGAAGAC CTAATCGCAG CTTTACAATC GAATCAAATT GATGTGATTA CATTTACAAG CCCTTCTACA GTTGACAGCT TTGTAAAGTT ACTTGAGGGT ACAAACTGGA GAGAATGGAT AAAAAAATGT ACAATTGCTT GTATAGGACC AATAACAGAA AAAGAGGCAA GAAAGTATTT TAAAAATGTG CTTGTTCCTG AAGAATATAC GATAGAATCA TTGATACAAT GCATTTCCAA ATTTTATGTG AATGCATAA
|
Protein sequence | MNALIGKKVL VTRARHQAGQ MSAAVRKESG IPMEIPLLRM DGVSQEKLQS VAKQLHVYDW IIFTSKNGVR FFLEAIHQKL PPAVKIAAVG IKTAQELEAR GYQVHFVPTA FVAETFAMEF VQTLNGTERI LFPKGNLARD VISVKLREAH ILVEELVVYE TKLNDEKKED LIAALQSNQI DVITFTSPST VDSFVKLLEG TNWREWIKKC TIACIGPITE KEARKYFKNV LVPEEYTIES LIQCISKFYV NA
|
| |