Gene Bcer98_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3169 
Symbol 
ID5345523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3216642 
End bp3218273 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content35% 
IMG OID640840662 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001376387 
Protein GI152976870 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA ATCCATTTCA TCAGTTGGAC GTTATAAGGA AAGCTTCTCA AAATGGTAAA 
ATAATAACAG ATTGTTACCG TCTGATGTAT AAAAGAGAAC TATGGATTAA AGCATACGTA
AAGCTATATC CGAATGCAGG GAATCTAACA AAAGGAACGT CTGAAGAAAC AATCGATGGT
TTTTACTTAC AAAAGATTGA TGAAATCATT GACCAACTCA AGAAGGGGAT GTTTCGTTTT
GCACCTGTAA GAAGAGCTTA TATTTCAAAA GCAAACGGTA AAAAGAGACC TCTAGGAGTT
CCGAACTTTA AAGATAAGTT GGTACAAGAA GTAATGAGAA TGATTTTGGA AAATGTTTAT
GAACCAACAT TCTCAGATAA CTCTCATGGA TTTAGAGAAG GGAGAAGCTG TCACACAGCA
TTATCCCAAA TCAAGAACAC ATGGAAGGGA TTAACATGGT GTATAGAAGG AGCCATAAAA
GGCTTCTTTG ATCATATTGA CCATTCTGTA CTCATAAATC TTATTTCAAA AAGAATGAAT
GACCATCGTT TTCTTCTACT TATCCACAAT GCACTTGCAA GTGGTGTGAT GGAAAACTGG
ACTTATCAAA AAACATACAG CGGTACACCA CAGGGCGGTA TTCTCTCCCC CTTATTAGCT
AATATCTATC TTCATGAGTT TGACATATTT TTGGAAAAGC AAATAGAGAA GTTTGATAAA
GAGAAATTAA GGGCGAGAAA TAAAGAATAT ACTAAAATAC ACTCGGAAAT CCGTTCGCTT
TCTCGAAAAG TCAAAAGCTT AGATGACAGA ACAGGGCATC GATTATGGAA AGGCAGAGAG
AAAGTGATAG AAACTATCGC AGAGTTAAAG CGCAAACAGA TTGGTATTTC CTCTGTCAAT
CCTATGGATA ATGACTATCA AAAAATGAAG TATGTTCGTT ATGCTGATGA TTTTGTAATA
GGGATAGCTG GTTCCAAAGA TTGTGCAGTG AATATAAAAG AAACGATAAA GAATTTTCTA
AAACAAGAAC TGCATCTTGA ATTAAGTGAA GAAAAAACAC TTATCAACCA CTTGGAGAAT
CCAATTTCCT TTCTTGGATA TGAATTTCGT AAGTGGAATG AAATAAAAAG GACTAGGGTC
TTGTATAAAA ACCATAAACA GAGGGCTCTC TCAAGAGCAA TTAAGTTGGA AATTCCCAAA
AAGAAAATGA AAGAATTTGC TATAAAAAAC GGATATGGTA ATCTTGATAA TTTCAAAAGT
ATACATCGAG CAAAGCTGCT TAATAATTCA GAGTTGGAGA TTCTGTGTAC CTATAACGCT
GAACTGCGAG GAATTGCAAA CTACTACAAG CTAGCGAATA ATTACCATCA TTTAGATAAG
TTGTTTTATT TAGCGGAGAG TAGTTTCATC AAAACCATAG CTAATAAACG TAGAAGCACC
TCAATGAAAG TGGCTACAAG CATGAGAACC CACAAACAAG GAGTACTTTG TCTAGTAAGA
AAAGATCAAC ATAACAATGA AAAACTTTAT CAGTTTGTGA AATTAAAAGA CCTGCCTAAA
CATAAGGGTG CGATTAAAGT TGATACACCA GAAATAGACT CATACGTGAA TACAATGAAA
TATTTTGGGT GA
 
Protein sequence
MATNPFHQLD VIRKASQNGK IITDCYRLMY KRELWIKAYV KLYPNAGNLT KGTSEETIDG 
FYLQKIDEII DQLKKGMFRF APVRRAYISK ANGKKRPLGV PNFKDKLVQE VMRMILENVY
EPTFSDNSHG FREGRSCHTA LSQIKNTWKG LTWCIEGAIK GFFDHIDHSV LINLISKRMN
DHRFLLLIHN ALASGVMENW TYQKTYSGTP QGGILSPLLA NIYLHEFDIF LEKQIEKFDK
EKLRARNKEY TKIHSEIRSL SRKVKSLDDR TGHRLWKGRE KVIETIAELK RKQIGISSVN
PMDNDYQKMK YVRYADDFVI GIAGSKDCAV NIKETIKNFL KQELHLELSE EKTLINHLEN
PISFLGYEFR KWNEIKRTRV LYKNHKQRAL SRAIKLEIPK KKMKEFAIKN GYGNLDNFKS
IHRAKLLNNS ELEILCTYNA ELRGIANYYK LANNYHHLDK LFYLAESSFI KTIANKRRST
SMKVATSMRT HKQGVLCLVR KDQHNNEKLY QFVKLKDLPK HKGAIKVDTP EIDSYVNTMK
YFG