Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3050 |
Symbol | holA |
ID | 5344420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3096648 |
End bp | 3097658 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640840546 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_001376271 |
Protein GI | 152976754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.132953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TACATAAGAA AATTAAAAAG AAACAGTTTG CTCCGTTTTA TTTATTGTAT GGAACGGAAG CCTATTTTAT AAATGAAACA ATCGATTTAA TTACAGTAGA GGCACTTGCC GAAGAAGATC GTGATTTTAA TATTGTTACA TATGATTTAG AAGAGGCGTA TTTAGAGGAT GTAGTAGAGG ATGCAAGGAC GCTTCCATTC TTTGGAGAGC GAAAAATATT ATTAATAAAG TCCCCGTTAT TTTTAACATC ACAGAAAGAA AAATTGGAGC AAAATATAAA AATCCTTGAG GAATATATTG CTGAACCATC TCCATTTTCG ATCATGATTT TTATCGCTCC ATATGAAAAG TTAGATGAGC GAAAAAAAAT TACGAAGTTA TTAAAGAAAA CGGCTGAGGT AGTAGAAGCG AATGCTATGC AAGTACAAGA TGTTAGGAAA TGGATTGTAA AGCGTGCTGA AGAAGTTCAT GTGCATGTTG AAGAGGCGGC TGTAAGTTTG CTTTTGGAGC TCGTAGGGAG CAATGTAACA ATGTTAGCAA AGGAAATGGA TAAGTTAACA CTGTATGTTG GAACGGGCGG AGACATTACA ACAAAACTTG TAAGTGAACT TGTACCGAAG TCAGTTGAGC AAAATGTTTT TGCCTTAACA GAAAAAGTCG TAAAAAAAGA TATAGCAGGA GCAATGAAAA TATTAGATGG CTTATTTACA CAACAGGAAG AACCAATTAA ATTATTAGCG TTGCTAGTGA GTCAATTCCG TTTATTACAT CAAGTAAAAG AACTACAGCA GCGAGGATAC GGACAAAATC AAATTGCTTC GCATATTGGT GTTCATCCGT ACCGAGTAAA ATTGGCGATG AATCAAACGA AACTTTTCTC ATTTGAAGAA TTGAAAAAGG TAATTTTCGA GTTAGCGGAA GCGGACTATA GTATGAAAAC AGGGAAAATG GATAAGAAGT TAGTTCTAGA ATTTTTCTTA ATGAGACTGA ATCATATGTG A
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Protein sequence | MSDIHKKIKK KQFAPFYLLY GTEAYFINET IDLITVEALA EEDRDFNIVT YDLEEAYLED VVEDARTLPF FGERKILLIK SPLFLTSQKE KLEQNIKILE EYIAEPSPFS IMIFIAPYEK LDERKKITKL LKKTAEVVEA NAMQVQDVRK WIVKRAEEVH VHVEEAAVSL LLELVGSNVT MLAKEMDKLT LYVGTGGDIT TKLVSELVPK SVEQNVFALT EKVVKKDIAG AMKILDGLFT QQEEPIKLLA LLVSQFRLLH QVKELQQRGY GQNQIASHIG VHPYRVKLAM NQTKLFSFEE LKKVIFELAE ADYSMKTGKM DKKLVLEFFL MRLNHM
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