Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_2676 |
Symbol | def |
ID | 5346169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 2760636 |
End bp | 2761262 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640840179 |
Product | peptide deformylase |
Protein accession | YP_001375905 |
Protein GI | 152976388 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00123074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACTACA TATGCTTTAC CATGACTTTT TTTATTTCCT TTGGTAGACT TAAGGAGAAA GGAGAGATTA CAATGCTTAC AATGAACGAT GTAATTCGTG AAGGAAATCC GATTCTCAGA ACAGTAGCAG AAGAAGTACA GCTGCCAGCT AGCGAAGAAG ATACACAGAC ACTAAAAGAA ATGATTGAGT TTGTCATAAA CAGTCAAAAC CCGGAAATGG TTGAAAAATA TAATTTGCGC CCAGGGATTG GATTAGCGGC TCCACAAATT GGTATTTCGA AAAGAATGAT TGCGATTCAT GTTACGGATA CAAATGAAAC ATTATATAGC TATGCATTGT TCAATCCAAA AATCATTAGT CATTCCGTTG AACGTACATA CTTACCAGCT GGCGAAGGGT GTTTATCTGT TGATCGTGAA GTACCTGGAT ATGTTCCTCG CTATGCAAGA ATTACAGTGA AAGCAACAAC TGTTGATGGA GAAGAAGTAA AATTACGGTT AAAAGGCTTA CCAGCGATTG TCTTCCAACA TGAAATCGAT CATTTAAATG GCGTCATGTT CTATGATCAT ATTAATCAAG ATAATCCTTT TGCTGTTCCT GAAAACGCAA AACCTCTTGA ACGCTAA
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Protein sequence | MYYICFTMTF FISFGRLKEK GEITMLTMND VIREGNPILR TVAEEVQLPA SEEDTQTLKE MIEFVINSQN PEMVEKYNLR PGIGLAAPQI GISKRMIAIH VTDTNETLYS YALFNPKIIS HSVERTYLPA GEGCLSVDRE VPGYVPRYAR ITVKATTVDG EEVKLRLKGL PAIVFQHEID HLNGVMFYDH INQDNPFAVP ENAKPLER
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