Gene Bcer98_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2562 
SymbolmurD 
ID5344536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2661866 
End bp2663221 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content37% 
IMG OID640840065 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_001375791 
Protein GI152976274 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0734427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACGG TAACTGATTA TCAAAATAAA AATATTCTTG TATTAGGTAT TGCAAAAAGT 
GGGTATGCAG CAGCAAATTT ATTAAAAAGC TTAGGAGCAA ATGTCATTGT AAATGATGGG
AAGCCTTTAG CGAATAATGA GTTAGCAGCA GAACTACAAG CGAAAGGGAT GGATGTAGTA
TGTGGAGGCC ATCCATTAGA ATTATTAGAA AGAAATATTG CGCTTGTAGT GAAAAATCCA
GGAATCCCAT ATTCCAACCC ACTGCTAGTT GCAGCGACAG AGAAACAGAT TCCTATTATC
ACGGAAATAG AATTAGCATA TCGTATTTCA GAGGCGCCAT TTATTGGTAT TACAGGATCA
AATGGTAAAA CAACAACAAC AATGCTAACG TTTGAAATGT TAAAAGAGGG AGAAAAGCAT
CCCGCTATTG CTGGTAACAT AGGAACAGTA GCATGTGAAG TAGCACAGGC GGCGAAAGCG
AATGAAGTGC TTGTGACAGA ACTTTCATCA TTTCAATTAA TGGGTGTGGA GACATTTCAG
CCTAAGATTG CTGCATTTTT AAACTTATTT GAAGCACATT TAGATTACCA TGGTACAAAA
AAAGAATATG GTTTAGCGAA AGCGAATATT TTTAAAAACC AGACAGCAGC AGATTATAGT
GTGATAAATG CAGATGATGC GGATGTGATG GAATTATCTG CTAATAGCAA AGGGCAAAAG
ATATTGTTTT CTACTACAAA AGAAATTGAA GATGGCGCAT GTATAAAAGA GAATGCTCTG
TATTTTAAAG GTGAGAAAGT TGTTGAAATC AAGGACATTG TTTTACCAGG TAAACACAAC
TTGGAAAATA TTTTGGCGGC AATGAGTATT GCGAAATTGT TAGGTGTAGC AAATGAGGCA
ATTGTTGCCG TGTTAAAACG ATTCACAGGT GTAAAGCATC GTTTAGAATA TGTAACAACG
ATTCATAACC GAAAGTTTTA TAATGATTCA AAAGCAACGA ATATATTGGC GACGGAGAAG
GCATTATCAG CATTTACAAG CCCTGTTATT CTACTTGCAG GCGGACTAGA TCGCGGGAAT
GAATTTGATG ATTTAATTCC GTATTTTGAA CAACATGTAA AAGCGATTGT AACTTATGGA
CAAACTGCAC CGAAACTCGT TCATGCAGCT GAAAAAGCAG GGTTAGCAAT TATTGAAGCT
GTCCATCATT TAGAAGAAGC GGTAGAAAGA GCATATGCTC ACTCTGCTGA TGGAGATGTT
ATCCTACTTT CACCAGCATG CGCGAGCTGG GATCAATTTA AAACATTTGA AGAAAGAGGA
GACATTTTTA TACAAGCTGT GCATAAACTT ATATAA
 
Protein sequence
MKTVTDYQNK NILVLGIAKS GYAAANLLKS LGANVIVNDG KPLANNELAA ELQAKGMDVV 
CGGHPLELLE RNIALVVKNP GIPYSNPLLV AATEKQIPII TEIELAYRIS EAPFIGITGS
NGKTTTTMLT FEMLKEGEKH PAIAGNIGTV ACEVAQAAKA NEVLVTELSS FQLMGVETFQ
PKIAAFLNLF EAHLDYHGTK KEYGLAKANI FKNQTAADYS VINADDADVM ELSANSKGQK
ILFSTTKEIE DGACIKENAL YFKGEKVVEI KDIVLPGKHN LENILAAMSI AKLLGVANEA
IVAVLKRFTG VKHRLEYVTT IHNRKFYNDS KATNILATEK ALSAFTSPVI LLAGGLDRGN
EFDDLIPYFE QHVKAIVTYG QTAPKLVHAA EKAGLAIIEA VHHLEEAVER AYAHSADGDV
ILLSPACASW DQFKTFEERG DIFIQAVHKL I