Gene Bcer98_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2517 
Symbol 
ID5347351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2616080 
End bp2617414 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content38% 
IMG OID640840022 
Productsun protein 
Protein accessionYP_001375748 
Protein GI152976231 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB
[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000512112 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAA ACGTTCGTGA GTTAGCTCTT GATGGATTAA TGCAAGTAGA AAAAAGCGGT 
GCTTACAGTA ACTTGCTATT AAATCATTTG ATTGAAAAAA GTACAATTCA TAAAAAAGAT
ATCGGTTTAT TAACGGAGAT TGTGTATGGA ACGATTCAAC GTCGTGACAC ATTAGACTAT
TATTTACAGC CGTTTTTAAG AAAGAAAGTG GATGCATGGG TAAGGGTATT ACTTCGCTTA
TCTTTATATC AAATGCTTTA TTTAGACCGA GTTCCAGAAC GAGCTGCTAT TCATGAAGCA
GTTGAAATCG CAAAACGTCG CGGACATAAA GGAATTGCCG GAATGGTGAA TGGGGTATTG
CGCTCCATTC AACGAGAAGG TGTACCTTCT TTAGATGAGT TGAAAGATCC TGTGGAGCGT
CTTGCAATTG CGATGAGTCA TCCGACATGG CTTGTACAAG AATGGGTAGC TGCATATGGT
TTAGAGACAG CAGAAAAGAT GTGTGAAGTA AATATGTTAC CACCCGTCCC AACAGCGCGA
GTAAATGTTG ATAAAATAAC AGTAGAAGAA GCGATTGATT TATTAAATCA AGAAGGTGTT
GAAGCCAAAC GCGGCGATTT ATCTGATGAT GCAATTCAAA TTGAAAAAGG AAATGTAGCT
CATACAGAAG CGTTCCAAAA GGGGTTTCTT TCTATTCAAG ATGAAAGTTC CATGCTTGTC
GCACGAGCTG TAGAACCAAG TAAAGGAGAT ATGATTCTTG ATAGCTGTGC TGCTCCTGGC
GGAAAAACAA CGCATATGGC AGAACGATTA CGAGGAACTG GTAAGGTTAT GTCTCTTGAT
TTACATGATC ATAAAGTGCG CTTAATTAAA CAACAAGCGA ATCGACTTGG TCTGGAGAAT
GTGGAAACAA AGGCATTGGA TGCTAGAAAG GTGCAAGAGC ACTTTCAAAA TGAAAGTTTC
GATAAAATAT TAGTTGATGC ACCATGCTCT GGATTTGGTG TCATTCGACG TAAACCGGAT
ATTAAATTAG GGAAAGAAAA AGGAGATAGT GAAAGACTGT CGACAATTCA ACAAACGATA
TTAGATAAAG TTGCTCCTCT GTTAAAGACA GGCGGCCGCC TTGTCTATAG TACATGTACA
ATTGAAAAAA TAGAGAATGA ACAAGTGGTA GCAAATTTTT TACAAAAGCA TCCAGAATTT
GAGTGGGATA CTACGATGCA AGAACGTATG CCAGAAAAAT TACGTCCATA TATCAATAAA
GGACAAGTGC AAATTTTACC GCATTATTTT GCGACGGATG GCTTTTATAT TGCTTGTTTA
AGAAAGAAGG TGTAG
 
Protein sequence
MRQNVRELAL DGLMQVEKSG AYSNLLLNHL IEKSTIHKKD IGLLTEIVYG TIQRRDTLDY 
YLQPFLRKKV DAWVRVLLRL SLYQMLYLDR VPERAAIHEA VEIAKRRGHK GIAGMVNGVL
RSIQREGVPS LDELKDPVER LAIAMSHPTW LVQEWVAAYG LETAEKMCEV NMLPPVPTAR
VNVDKITVEE AIDLLNQEGV EAKRGDLSDD AIQIEKGNVA HTEAFQKGFL SIQDESSMLV
ARAVEPSKGD MILDSCAAPG GKTTHMAERL RGTGKVMSLD LHDHKVRLIK QQANRLGLEN
VETKALDARK VQEHFQNESF DKILVDAPCS GFGVIRRKPD IKLGKEKGDS ERLSTIQQTI
LDKVAPLLKT GGRLVYSTCT IEKIENEQVV ANFLQKHPEF EWDTTMQERM PEKLRPYINK
GQVQILPHYF ATDGFYIACL RKKV