Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_2494 |
Symbol | rimM |
ID | 5345728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 2592255 |
End bp | 2592770 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640839999 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_001375725 |
Protein GI | 152976208 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000966692 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT GGTTTAATGT AGGAAAAATT GTAAATACCC ATGGTGTGAG AGGAGAGGTT CGCGTCATCT CTCGCACCGA TTTCCCAGAA GAGCGATATA AAGTTGGGAA TACATTGTAC ATATGGGGAG AGAAAGGGAC TGAACCTCTT CCGGTAAAGG TTACATCTCA TCGTCAACAT AAAACGTTTG ACCTATTAAC ATTTGAAGGG TATAGCAATG TAAATGAGGT TGAGAAATTT AAAGGTTCCC TGTTAAAAGT ACCAGAAGAG CAATTGGGTG AGCTAGCAGA AGGTGAATAT TACTACCATG AAGTGATCGG TTGCAAAGTT GTAACGGAAA ATGGTGAAGA GTTAGGGACG ATTACGGAAA TTTTATCTCC TGGTGCGAAT GATGTTTGGG TAATTAAGCG TCCAAAAGGA CAAGATTTGT TAATTCCATA CATTGATGAT ATTGTATTGC AGGTTAATGT GGAACAAAAA CAAGTGACCA TTCATGTAAT GGAAGGATTG CTATGA
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Protein sequence | MTKWFNVGKI VNTHGVRGEV RVISRTDFPE ERYKVGNTLY IWGEKGTEPL PVKVTSHRQH KTFDLLTFEG YSNVNEVEKF KGSLLKVPEE QLGELAEGEY YYHEVIGCKV VTENGEELGT ITEILSPGAN DVWVIKRPKG QDLLIPYIDD IVLQVNVEQK QVTIHVMEGL L
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