Gene Bcer98_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2494 
SymbolrimM 
ID5345728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2592255 
End bp2592770 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content39% 
IMG OID640839999 
Product16S rRNA-processing protein RimM 
Protein accessionYP_001375725 
Protein GI152976208 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000966692 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT GGTTTAATGT AGGAAAAATT GTAAATACCC ATGGTGTGAG AGGAGAGGTT 
CGCGTCATCT CTCGCACCGA TTTCCCAGAA GAGCGATATA AAGTTGGGAA TACATTGTAC
ATATGGGGAG AGAAAGGGAC TGAACCTCTT CCGGTAAAGG TTACATCTCA TCGTCAACAT
AAAACGTTTG ACCTATTAAC ATTTGAAGGG TATAGCAATG TAAATGAGGT TGAGAAATTT
AAAGGTTCCC TGTTAAAAGT ACCAGAAGAG CAATTGGGTG AGCTAGCAGA AGGTGAATAT
TACTACCATG AAGTGATCGG TTGCAAAGTT GTAACGGAAA ATGGTGAAGA GTTAGGGACG
ATTACGGAAA TTTTATCTCC TGGTGCGAAT GATGTTTGGG TAATTAAGCG TCCAAAAGGA
CAAGATTTGT TAATTCCATA CATTGATGAT ATTGTATTGC AGGTTAATGT GGAACAAAAA
CAAGTGACCA TTCATGTAAT GGAAGGATTG CTATGA
 
Protein sequence
MTKWFNVGKI VNTHGVRGEV RVISRTDFPE ERYKVGNTLY IWGEKGTEPL PVKVTSHRQH 
KTFDLLTFEG YSNVNEVEKF KGSLLKVPEE QLGELAEGEY YYHEVIGCKV VTENGEELGT
ITEILSPGAN DVWVIKRPKG QDLLIPYIDD IVLQVNVEQK QVTIHVMEGL L