| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_2390 |
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| Symbol | hfq |
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| ID | 5343519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | - |
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| Start bp | 2477695 |
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| End bp | 2477919 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640839897 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_001375623 |
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| Protein GI | 152976106 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000174663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAT CAATCAATAT TCAAGATCAA TTTTTAAATC AACTACGTAA AGAAAATACG
TTTGTGACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GATTAATTAA AGGGTTTGAT
AACTTTACAG TTTTATTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACACGCTATT
TCTACATTTA TGCCTCAAAA GAATGTTGCA ATTGAATTAG AATAG
|
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| Protein sequence | MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI
STFMPQKNVA IELE
|
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