Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_2266 |
Symbol | |
ID | 5345779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 2366708 |
End bp | 2367433 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640839784 |
Product | sporulation polysaccharide deacetylase PdaB |
Protein accession | YP_001375510 |
Protein GI | 152975993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.33444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGAC GAAAAACTGC CAATATTATT ATTTGTTTTA TTAGTTTTAT ACATATATGT CAAGTGGACG AAGTACAAGC AAGTTTGTTA TTAAGAAAAG AGTTGGAACC TACTGGCTAT GTAACGTGGG AAGTTCCAAA TAAAGAGAAG ATTATCGCTA TTACATTTGA TGATGGACCA GATCCGATAT ATACGCCGCA AGTATTACAA TTACTGCGTC AATACAAAGC GGAAGCAACT TTTTTTATGA TTGGATTTCG AATTCAACGA AACCCTTATT TAGTGAAGCA AGTATTAAAA GAAGGACATG AAATTGGTAA TCATACAATG AATCACTTAT ACGCAAAAAG AACGCAGAGT GAAAAAGTAA AAAATGATAT TTTAGAGGGA AAGAAGTACT TAGCGAAGTG GATAAAAGAA CCTCTCCTCT TTCGTCCACC TGGTGGGGAA ATAAATGATA CCGTCTTTAC TACCGCAAAA GAAGCAGGAT ATCAAATTGT ATTATGGTCA TGGCATCAAG ATCCGCGTGA TTGGGCGAAT CCAGGTACCG CATCTATTGT GAACCATGTT TTGAAAAATG CGAAGAGTGG AGATATTGTC CTGTTACATG ATGGGGGGAG TGACCGTAGC CAAACAATAG AAGCGCTGGC GAAGATCTTA CCAGAGCTTC AACAAAGAGG ATATCGCTTT GTGAAGGTAT CGGAACTATT GCGTTATAAG CATTAA
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Protein sequence | MFRRKTANII ICFISFIHIC QVDEVQASLL LRKELEPTGY VTWEVPNKEK IIAITFDDGP DPIYTPQVLQ LLRQYKAEAT FFMIGFRIQR NPYLVKQVLK EGHEIGNHTM NHLYAKRTQS EKVKNDILEG KKYLAKWIKE PLLFRPPGGE INDTVFTTAK EAGYQIVLWS WHQDPRDWAN PGTASIVNHV LKNAKSGDIV LLHDGGSDRS QTIEALAKIL PELQQRGYRF VKVSELLRYK H
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