Gene Bcer98_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2266 
Symbol 
ID5345779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2366708 
End bp2367433 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content37% 
IMG OID640839784 
Productsporulation polysaccharide deacetylase PdaB 
Protein accessionYP_001375510 
Protein GI152975993 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR02764] polysaccharide deacetylase family sporulation protein PdaB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGAC GAAAAACTGC CAATATTATT ATTTGTTTTA TTAGTTTTAT ACATATATGT 
CAAGTGGACG AAGTACAAGC AAGTTTGTTA TTAAGAAAAG AGTTGGAACC TACTGGCTAT
GTAACGTGGG AAGTTCCAAA TAAAGAGAAG ATTATCGCTA TTACATTTGA TGATGGACCA
GATCCGATAT ATACGCCGCA AGTATTACAA TTACTGCGTC AATACAAAGC GGAAGCAACT
TTTTTTATGA TTGGATTTCG AATTCAACGA AACCCTTATT TAGTGAAGCA AGTATTAAAA
GAAGGACATG AAATTGGTAA TCATACAATG AATCACTTAT ACGCAAAAAG AACGCAGAGT
GAAAAAGTAA AAAATGATAT TTTAGAGGGA AAGAAGTACT TAGCGAAGTG GATAAAAGAA
CCTCTCCTCT TTCGTCCACC TGGTGGGGAA ATAAATGATA CCGTCTTTAC TACCGCAAAA
GAAGCAGGAT ATCAAATTGT ATTATGGTCA TGGCATCAAG ATCCGCGTGA TTGGGCGAAT
CCAGGTACCG CATCTATTGT GAACCATGTT TTGAAAAATG CGAAGAGTGG AGATATTGTC
CTGTTACATG ATGGGGGGAG TGACCGTAGC CAAACAATAG AAGCGCTGGC GAAGATCTTA
CCAGAGCTTC AACAAAGAGG ATATCGCTTT GTGAAGGTAT CGGAACTATT GCGTTATAAG
CATTAA
 
Protein sequence
MFRRKTANII ICFISFIHIC QVDEVQASLL LRKELEPTGY VTWEVPNKEK IIAITFDDGP 
DPIYTPQVLQ LLRQYKAEAT FFMIGFRIQR NPYLVKQVLK EGHEIGNHTM NHLYAKRTQS
EKVKNDILEG KKYLAKWIKE PLLFRPPGGE INDTVFTTAK EAGYQIVLWS WHQDPRDWAN
PGTASIVNHV LKNAKSGDIV LLHDGGSDRS QTIEALAKIL PELQQRGYRF VKVSELLRYK
H