| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_2242 |
|---|
| Symbol | |
|---|
| ID | 5346922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 2339121 |
|---|
| End bp | 2340815 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640839760 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001375486 |
|---|
| Protein GI | 152975969 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.555674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AGAAGATGAA AAAGTTAACG ACAGTTGCAG CGCCGGTGTT GGCAGTAAGT
ATGGCGCTGG CCGCATGTTC TGGATCAGGG GATAAAGAAA AGGCGAATAC AACACCGAAA
AGTGATGAAA AATCTGGAGG GAAATTAGCG GCAAAGCAAG TGCTTAATTT AACAGAGCCG
CAAGAAATTC CTTCAATGGA TTCTTCCAAG GCAACAGACC AAGTATCATT TCTTGTTATG
AATAACGTAA TGGAAGGATT ATATCGTTTA GGAAAAGATA ATAAAGTAAC TCCTGGTGTA
GCAGAATCCT ATAAGAAAAG CGATGATGGT AAAAAATATA CATTTACATT AAATAAAAAT
GCGAAATGGT CAAACGGAGA CCCTGTTACT GCGAAAGATT TCGTATTTGC TTGGAAGCGT
GCTCTAGACC CAAATACAGC TGCTGAATAT GCATATATTA TGTACGACTT AAAGAATGCA
AAAGCAATTA ATGAAGGAAA AGCACCACTT GATACGTTAG GGGTCAAAGC TGTAGATGAT
TATACATTAG AAGTAGAACT GGAAAACCCA ATTCCATATT TTGTTGAGTT AACATCATTT
GGAACATTCT ATCCACTTAA CGAAAAATTT GTAAAGGAAA AAGGGGATAA ATTTGGTTTA
GAAGCAGATA CAACGCTTTA TAATGGCCCA TTTACACTGA GTGAATGGCA ACATGAAGAA
GGATGGAAGT TAAAGAAAAA TGAGCAATAT TGGGATAATA AAACGGTGAA ATTAGAAGAA
ATTAACTTCA ATGTCGTCAA AGAGACTGGT ACTCGTGTAA ATTTATATGA AAGTGGCCAA
ATTGATCGTG CAGAAATTTC ATCTGAATTT GTAGATAAAT ATAAATCAAG CCCAGATTTC
TTTACAGAAG AAACACCATC AACATTTTTC CTACGTTTAA ATCAAAAACG TGGCGGAAAA
GATACAGTGT TTACAAATAA AGATTTACGT TTAGCAATTG CAATGGCATA CGATAAAAAA
GGATTGACCA ATGTGATTTT AAATGATGGT TCCAAGCCAG CAGACTATTT TGTACCAAAA
GAATTTGCGA AAGGCCCAGA TGGAAAAGAC TTCCGTAAAG AGAACGGAAA TATTTTGAAA
ACAGATGTGA AGAAAGCGAA AGAACATTGG GAGAAAGCGA AAAAAGAGCT TGGAAAAGAT
AAGGTTACAG TAGAATTACT AAATTATGAT ACGGAATCGT CAAAAAAAAT AGGTGAGTAT
TTAAAAGGGG AATTAGAGAA GAACTTACCA GGCTTAACAG TAAATTTAAA AAACCAGCCG
TTTAAACAAA AACTAAAGCT AGAAACAGAC CAAGATTATG AGTTATCATT TGCAGGATGG
GGCCCTGACT ATTTAGATCC AATGACATTT ATTGATATGT TTATAACGAA CGGAGCACAT
AACCAATCAG GATATTCCAA TCCAGAATAT GATAAACTTG TAGAACAAGG AAAAGGAGAG
TTACTAACAA AGACAAAAGA ACGCTGGAAC GGATTACTGA AAGCTGAGAA AATGTTACTT
GAAGATGCGG CAATTGCCCC GTTATTTCAA CAGGGTAAAG GAATTATCCA AAAACAAAAA
GTAAAAGGAA TTGTTCGCCA TCCAGTTGGT GGAGATTATA GTTATAAGTG GGCATATATT
TCTGATGATA AATAA
|
|---|
| Protein sequence | MKKKKMKKLT TVAAPVLAVS MALAACSGSG DKEKANTTPK SDEKSGGKLA AKQVLNLTEP
QEIPSMDSSK ATDQVSFLVM NNVMEGLYRL GKDNKVTPGV AESYKKSDDG KKYTFTLNKN
AKWSNGDPVT AKDFVFAWKR ALDPNTAAEY AYIMYDLKNA KAINEGKAPL DTLGVKAVDD
YTLEVELENP IPYFVELTSF GTFYPLNEKF VKEKGDKFGL EADTTLYNGP FTLSEWQHEE
GWKLKKNEQY WDNKTVKLEE INFNVVKETG TRVNLYESGQ IDRAEISSEF VDKYKSSPDF
FTEETPSTFF LRLNQKRGGK DTVFTNKDLR LAIAMAYDKK GLTNVILNDG SKPADYFVPK
EFAKGPDGKD FRKENGNILK TDVKKAKEHW EKAKKELGKD KVTVELLNYD TESSKKIGEY
LKGELEKNLP GLTVNLKNQP FKQKLKLETD QDYELSFAGW GPDYLDPMTF IDMFITNGAH
NQSGYSNPEY DKLVEQGKGE LLTKTKERWN GLLKAEKMLL EDAAIAPLFQ QGKGIIQKQK
VKGIVRHPVG GDYSYKWAYI SDDK
|
|---|
| |