Gene Bcer98_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2028 
Symbol 
ID5345472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2134021 
End bp2134722 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content33% 
IMG OID640839569 
ProductCRISPR-associated Cas family protein 
Protein accessionYP_001375295 
Protein GI152975778 
COG category[L] Replication, recombination and repair 
COG ID[COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTAC ATATTAAATT ACAAACGAAT CGGTTTCCGA TTTCATATAG AATGATGATG 
GTGAGTTTTA TTAAAGAAGC TTTGAAGTTA TCCGATGCTG CATATTTTCA ACAGATATAC
CAAGAAAGTA AAGCGAATCG ACCATTCTCT TACGGCGTAT ATATACATGA TTATAAACTT
AATGCAACAG AGTTTCATAT TAAAGGATAT GTTGGTCTTA CAATAACTTC TCCAGATGCT
CAATTTATGT TGCACTTTTA CAATGGGCTT ATGAAAATGA ACGACTTTCG ATATAAAGGC
TTTAGTCTAA AACGAATGAA GGTACAAATG GTAAATAGTG CGGATATTAA TCAAAATCAT
GTGTATTTTA AAACACTATC CCCTCTATTA ATCCGTGATA AACACGCCAA GCCAATTTTC
ATAGATGATG ATAAGTTTGA AAAAGAATTA AACTATATTT CTGACACAGT TCTGAAAGAA
TTTCGTGGGT ATGGACTAAA ACAACCACTT ATTTTTACAA GTAAGAATAT GAAAAAAGTA
GTGGTCAAGG AGAAAATTCA TAGTGATCAT GATACGCTAT TTTTTACGGG CTATCATGGG
ATTTTTTCCT TACAAGGTGC TGTGGAAGAT TTGAAAATAC TTTCGGAAAT TGGATTAGGC
TTTAGATCTA GTCAAGGATT CGGTGCTGTG GAGGTGGTAT AA
 
Protein sequence
MRLHIKLQTN RFPISYRMMM VSFIKEALKL SDAAYFQQIY QESKANRPFS YGVYIHDYKL 
NATEFHIKGY VGLTITSPDA QFMLHFYNGL MKMNDFRYKG FSLKRMKVQM VNSADINQNH
VYFKTLSPLL IRDKHAKPIF IDDDKFEKEL NYISDTVLKE FRGYGLKQPL IFTSKNMKKV
VVKEKIHSDH DTLFFTGYHG IFSLQGAVED LKILSEIGLG FRSSQGFGAV EVV