Gene Bcer98_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2008 
Symbol 
ID5347513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2107164 
End bp2107991 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content39% 
IMG OID640839550 
Productpolysaccharide deacetylase 
Protein accessionYP_001375276 
Protein GI152975759 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000244714 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAATG GAATTCCAAT GACAACTTTA GTAAAAAGGG TACTGCTACT TTGCATCGGG 
GCTATTTTTT TATCCGAAAT GGTTTTAGGA TTAGGGAATG CTGTTCATGC AAGTACAGAA
GATGATGCAA AATCTGTTCA ACTTGTAAGT GAAATTCAGA CAGCTCTTGC TCCGAAAGAA
GCACCGAAGC AATATAACGG GCAAGTTCGA AAAGTCGCTT ACTTAACATT TGACGATGGT
CCTGGAAAAT ACACTGCTGA ACTTTTAGAT ATGTTGAAAA AAGAAGATGC AAAAGCTACA
TTTTTCCTAA TCGGTTCAAA TGTCAAAGCA TTCCCTGATT TAGTTAAACG TGAACACGCA
GAAGGTCATT ATGTTGGTAT GCACAGTATG ACGCATAACT ACAAAAAACT TTACACAGAA
GGTCGTTACG TTGATGAAAT GAAAGAGGAT CAGGGCTTAA TTGCCGGCGT TATCGGAAAA
TCACCAGTTT TAACACGCCC ATCTTACGGA TCTATGCCTG GATTAAATGA AGCTCTTCGC
AATAAAGTAG TCGAAAACGG CTTAAAAGTG TGGGACTGGA CAATTGATTC TTTAGACTGG
AAATATAATA AAATGCCAGT CGATGCAGCA TCTGCTCAAA TTGTTCAAAA CGTGCTTGCT
GGTGCAAACA AGCCAACGGA AGTTATTCTT ATGCATGACA TTCATCCACA ATCCGTAAAA
GCAGTGCCTG CTATTATTAA AGGCTTAAAA GAAAAAGGAT ACGAGTTAGA AAGCTATAAA
GAGGACGAAC ACTTCCCATT AAACTTCTGG CATGATCATC GTATCTAA
 
Protein sequence
MHNGIPMTTL VKRVLLLCIG AIFLSEMVLG LGNAVHASTE DDAKSVQLVS EIQTALAPKE 
APKQYNGQVR KVAYLTFDDG PGKYTAELLD MLKKEDAKAT FFLIGSNVKA FPDLVKREHA
EGHYVGMHSM THNYKKLYTE GRYVDEMKED QGLIAGVIGK SPVLTRPSYG SMPGLNEALR
NKVVENGLKV WDWTIDSLDW KYNKMPVDAA SAQIVQNVLA GANKPTEVIL MHDIHPQSVK
AVPAIIKGLK EKGYELESYK EDEHFPLNFW HDHRI