| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1908 |
|---|
| Symbol | |
|---|
| ID | 5346722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 2021230 |
|---|
| End bp | 2022435 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640839464 |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001375190 |
|---|
| Protein GI | 152975673 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CAAAAGTACG TGTGGAAAAC GTGACAAAAG TATTCGGGAA AAATCCTCAA
CGAGCAGTTG CTTTATTAAA AGAGGGGAAA AGTAAAACAG AAATCTTGAA AGAAACAGGA
ATGAATGTTG GTGTGAAAAA AGCAACATTT GAAGTATATA CAGGAGAAAT ATTTGTGATT
ATGGGACTTT CAGGAAGCGG AAAATCAACA CTTGTTCGTA TGCTTAACCA ACTTATAAAG
CCAACAGCGG GGCATATATA CATAGATGAA GAAGATATCG CAACAATGGG GAAAGAGGCG
CTTCGCAAAG TACGAAGAAC GAAGATGAGC ATGGTATTTC AAAAATTTGC TTTATTCCCA
CATCGAACTG TGATTCAAAA TGTAGCGTAT GGTTTAGAAG TACAAGGGGT ACCGGTAGAA
GAAAGAGAAA CAAAAGCGTT AGAATCTCTC AAGTTAGTTG GATTAGATCA TCATAAAGAT
AGTTATCCAG GACAATTAAG CGGTGGGATG CAGCAACGTG TTGGAATTGC AAGAGCGCTT
ACGAATGATC CAGACGTGCT TCTAATGGAT GAGTCATTTA GTGCATTAGA TCCATTGATT
CGAAAAGAAA TGCAGGATGA ATTATTAGAG CTGCAAGATA AAATGGAGAA AACAATTATT
TTTATTACGC ATGATTTAGA CGAAGCGCTT CGAATTGGAG ATCGCATTGC GCTGATGAAA
GATGGAGAAA TTGTCCAAAT TGGAACACCT GAAGAAATTA TGATGAGCCC AGCAAATGAA
TTTGTAGAGA AATTTGTTGC TGATGTGAAC TTAGGAAAAG TCATTACTGC TGAATCTATT
TTAAAAAGAC CAGAAACATT ACTGATTGAC CGCGGACCGC GCGTAGCTCT GCAAATTATG
AGAAATGCGG GGGTATCTAC TGTATATGTA GTCAATAAAA AACATGAGTT TTTAGGAATT
TTAACGGCTG ATGATGCAAG TAAAGCAGTG CAAAAACAAT GGCCAATTGC AGACTTGTTA
ATCACAGATC TTCCTCATGT ATATGTAGAT ACATTACTAG AAGAAACGTA TGCAAAAATG
GCAGAAATGA AATTTCCTTT ACCTGTTATT GATGAAAAAA ATAGGCTAAG GGGGATTATT
AAACGAGAAA GTGTCATTCA AGCCCTTGCC GGAAATATTG AAGATGAGGT GAATGACAAT
GAATAA
|
|---|
| Protein sequence | MKNTKVRVEN VTKVFGKNPQ RAVALLKEGK SKTEILKETG MNVGVKKATF EVYTGEIFVI
MGLSGSGKST LVRMLNQLIK PTAGHIYIDE EDIATMGKEA LRKVRRTKMS MVFQKFALFP
HRTVIQNVAY GLEVQGVPVE ERETKALESL KLVGLDHHKD SYPGQLSGGM QQRVGIARAL
TNDPDVLLMD ESFSALDPLI RKEMQDELLE LQDKMEKTII FITHDLDEAL RIGDRIALMK
DGEIVQIGTP EEIMMSPANE FVEKFVADVN LGKVITAESI LKRPETLLID RGPRVALQIM
RNAGVSTVYV VNKKHEFLGI LTADDASKAV QKQWPIADLL ITDLPHVYVD TLLEETYAKM
AEMKFPLPVI DEKNRLRGII KRESVIQALA GNIEDEVNDN E
|
|---|
| |