Gene Bcer98_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1897 
Symbol 
ID5345661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2012256 
End bp2012999 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID640839454 
Productspore cortex-lytic enzyme SleB 
Protein accessionYP_001375180 
Protein GI152975663 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID[TIGR02869] spore cortex-lytic enzyme 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0572878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA TCAGTATTTT AAAAATACTC CTTTTACTTG TATTGATTGG TATATCCATC 
ATCGTAAGTA GTGAACAAAC AAAAAATGTA CAGGCCTTTT CTAATCAAGT CATTCAAAGA
GGCGCATCTG GGGAAGATGT CATCGAATTG CAATCACGCC TGAAATATAA CGGATATTAT
ACAGGAAAAG TCGATGGTGT ATTTGGGTGG GGTACATATT GGGCACTGCG AAACTTTCAG
CAAAAATTTG GGTTAAAGGT TGATGGGCTA GCGGGGCCAA AAACAAAACA AATGCTTATA
AAAGCAACCA AATATGAGAA ATCGACTGGT GGCGGCGGAC AAAGTAGTAA GCCGGCGCAA
AACAAAGGAA CCAATGTTCC AAATGGTTAT TCTCAAAATG ATATTCAATT AATGGCCAAT
GCGGTCTATG GTGAAGCAAG AGGAGAGCCG TATATCGGAC AAGTTGCAGT TGCAGCGGTA
ATTTTGAACC GTGTAACGAG TCCATCGTTT CCTAACACAG TTTCGGGTGT TATTTTTGAA
CCGCGTGCCT TTACAGCAGT CGCAGACGGA CAAATTTATT TAACGCCGAA TGAAACGGCG
AAAAAAGCAG TATTAGATGC GATAAATGGC TGGGATCCAA CTGGAAATGC TCTTTATTAT
TTCAATCCAG ATACTGCAAC GAGTAAGTGG ATTTGGAGTC GTCCACAAAT CAAAAAAATT
GGTAAACATA TTTTCTGTAA ATAG
 
Protein sequence
MRKISILKIL LLLVLIGISI IVSSEQTKNV QAFSNQVIQR GASGEDVIEL QSRLKYNGYY 
TGKVDGVFGW GTYWALRNFQ QKFGLKVDGL AGPKTKQMLI KATKYEKSTG GGGQSSKPAQ
NKGTNVPNGY SQNDIQLMAN AVYGEARGEP YIGQVAVAAV ILNRVTSPSF PNTVSGVIFE
PRAFTAVADG QIYLTPNETA KKAVLDAING WDPTGNALYY FNPDTATSKW IWSRPQIKKI
GKHIFCK