Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_1880 |
Symbol | |
ID | 5345427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 1993897 |
End bp | 1995735 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640839437 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001375163 |
Protein GI | 152975646 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.139426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC ATGCGTTAAA AATTGGTATT AAATTTACAT ATAGAGGTGA AAAAGGAATG AGTGCTCGGC TAATGGAACT CATTGATGTG AACACAATAA AAATAATGGC GGAACAGTTT TATAAATTAA CAAATATGGC ACACCAACTT CTTGATGCTG AAAGAGAATG TATTTTTTCA TTCGGTATAG ATCAAGAAAT AGATTATAGA TTGACTACGA TTGAAATTCC CATTTTTTTA GACGAGCAAT ATTTAGGGGC TTTTATTGCT TGTCCTATAA AAAAGGATAT GGTTTATTGT CAAAAATATT TCGAAACACT TTCCAGTCTT ATTGTAAATC ATGCGAGAAC TCAACTTCAA AACCAAAATC AAAATTTACA ATTGCTTGCA AAGGAGAAAG AACAATTATA TACCATTTTA CAAAATATGC CTGTTATGGT TGATGCTCTT GACCTTGATG GTGAATTTAT TTTATGGAAT CGTGAATGCA AGAGTGTAAC GGGTTACACA GCAGAAGAAA TGATCGGGAA TCCAAAAGCT CTTGAATTAT TATATCCAGA TGCAAACTAT CGTCGACAAA TCCAAGAAAA GTTTGCCGTT TACGGAAGAG ATTTTCGAGA TTGGGAAATG AACTTAACTT GTAAAAATGG CGAGCAGAAA ACCATTATGT GGTCTAATAT ATCCAATCGC TTTCCGGTTT CTGGATTTAG TTACTGGGCT GTTGGGGTCG ATATTACCCA TTTAAAAAAG ATCGAAGCCC AGTTAAAAGA ACAGACATCC GAATTGGAGC TCATTTTTCA AGCGCTACCA GATTTATGCT TTTTAACAGA AGCTGATGGA ACGATTATAG ATTATAAAGC CGGTTCACCT ACGAAATTTT ATGTACCAGC AGAAGATTTT ATGGGGAAAA AGTTTTATGA AGATTTGCCA TCTCCTGTGG CACAACAGTT CCAAGAAGCT ATCGATCAGG TGCAGAAAAC AGAATCGATG GTTATTGTAG AGTATTCCCT TTCTTTGAAA GGAAGCATAA GCTTTTTTGA AGCTAGATGT TTTCTACTAT TGAAAGATAG AATTATGATT ATTGTTCGTG ATATTACTGA AAGAAAAAAA ACAGAAGAGT TATTAAATAA ATCAGATACG CTTGCAGCAA TTGGACAATT AGCTGCAGGA GTAGCACATG AGGTTCGAAA TCCATTAACG GTAATTAAGG GGTTTATTCA GCTCTTTCAA ATAAATAAAG AAGATCAAGG GAAATACTTT GACCTTATGC TTTCAGAGAT TGAACGAATT GAGTCTATTC TTCACGAATT TTTATCAATC GCTAAAACAG ATATAATTCC TACAGAAAAG AAAAATCTTT ATTCTATCAT GAAAAATGTT GTTTCACTAA TTAATACAAA AGCAATTATG ACAAATATTC AAATTGAAAT TATATCGGAA TCAAAAGAAT TAGTAATTGA GTGCTGTGAA AATCAATTAA AACAAGTATT TATTAACATT TTACAGAATT CAATCGAGGC GATGCCAGAT GGTGGTAAAA TCTTTATTCA TATGAAAACG AATAGAATAA ATGAAGTGAT AATTGATTTA GTAGACGAGG GAATTGGTAT ACCGGAAGAA CGTATTAAAA GGTTAGGAGA ACCATTCTAT AGTACAAAAG AAAAAGGCAC TGGAATTGGT TTAATGTTAA GCTATAAAAT TATTGAACAA CATCAAGGAA GAATTAGTAT TATGAGTAAA GTTGGCGTTG GAACATCTGT TACGATTTAT TTACCAATGT TCCAACAAGA GAAATCTCTT TCTGACAATG AACGTCCCGT TACTATAGCG AATTCATAA
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Protein sequence | MKKHALKIGI KFTYRGEKGM SARLMELIDV NTIKIMAEQF YKLTNMAHQL LDAERECIFS FGIDQEIDYR LTTIEIPIFL DEQYLGAFIA CPIKKDMVYC QKYFETLSSL IVNHARTQLQ NQNQNLQLLA KEKEQLYTIL QNMPVMVDAL DLDGEFILWN RECKSVTGYT AEEMIGNPKA LELLYPDANY RRQIQEKFAV YGRDFRDWEM NLTCKNGEQK TIMWSNISNR FPVSGFSYWA VGVDITHLKK IEAQLKEQTS ELELIFQALP DLCFLTEADG TIIDYKAGSP TKFYVPAEDF MGKKFYEDLP SPVAQQFQEA IDQVQKTESM VIVEYSLSLK GSISFFEARC FLLLKDRIMI IVRDITERKK TEELLNKSDT LAAIGQLAAG VAHEVRNPLT VIKGFIQLFQ INKEDQGKYF DLMLSEIERI ESILHEFLSI AKTDIIPTEK KNLYSIMKNV VSLINTKAIM TNIQIEIISE SKELVIECCE NQLKQVFINI LQNSIEAMPD GGKIFIHMKT NRINEVIIDL VDEGIGIPEE RIKRLGEPFY STKEKGTGIG LMLSYKIIEQ HQGRISIMSK VGVGTSVTIY LPMFQQEKSL SDNERPVTIA NS
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