Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_1877 |
Symbol | |
ID | 5347528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 1990424 |
End bp | 1991104 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640839434 |
Product | aspartate racemase |
Protein accession | YP_001375160 |
Protein GI | 152975643 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.211864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA TTGGGTTAAT CGGTGGGTTA AGTTGGGAGT CAACATCTTT ATATTATAAA CATATCAATA CGCTTGCACT TACCCAATAT AATCAAAATG CAAAACTCGT TTTATACAGC ATGGATTTTG GGGAAATCAC AACATTATTG CAAAATCATC AATATGAGGA AGTGAAACAT GAATTAATTG ATGTAGCGAA GAAAGTGGAA AGCTCCGGCG CTGACTGTAT ACTCATGTGT TCCAATACTG TTCATCAATT TGCAGATGAA GTAGAAAAAG CTGTATCTAT CCCTCTCCTC CATATAGGTG ATGTAAGTGC AGAAAAAATT GTGAAACAGC AGATTAAGCG CATCGGTCTT CTCGGAACAA AGCAAACAAT GGAAAAAGAT TTTTATAAAG CAAGGTTAGC TAATTATGGG ATTGAAACAA TGATTCCTCA TAAAGATGAA CGAAACTTGA TCCATCATAT TATTTTAAAT GAGTTAAGTA AAGGGATCCT TTCACCGCAA TCAAAAGAAA TATTGTTACA AATTGCAACG ACACTAATTG GAAACGGAGC TGAAGGTATT TTATTAGGAT GTACAGAAAT TCCTTTACTG CTCTCGCAAA AAGATCTCCC TATTCCCGTG TTTGATACAG CTTATCTACA TGCAGAAACT GCTGTGCAAT TTGCGGGGTA A
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Protein sequence | MKTIGLIGGL SWESTSLYYK HINTLALTQY NQNAKLVLYS MDFGEITTLL QNHQYEEVKH ELIDVAKKVE SSGADCILMC SNTVHQFADE VEKAVSIPLL HIGDVSAEKI VKQQIKRIGL LGTKQTMEKD FYKARLANYG IETMIPHKDE RNLIHHIILN ELSKGILSPQ SKEILLQIAT TLIGNGAEGI LLGCTEIPLL LSQKDLPIPV FDTAYLHAET AVQFAG
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