Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_1725 |
Symbol | prpD |
ID | 5344147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 1834093 |
End bp | 1835529 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640839296 |
Product | 2-methylcitrate dehydratase |
Protein accession | YP_001375022 |
Protein GI | 152975505 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA CAAATGAAAT TAAACAAAAA GATGCAATTT TAGAAGAGAT TACGGACTAT GTATTAAATA AAGAGGTAAC AAGTGTAGAA GCATTCAGCA CCGCACGTTA TGTGCTACTT GATACACTTG GATGCGGTAT CTTAGCATTA CAATATCCAG AGTGTACGAA ATTACTTGGA CCGGTTGTAC CAGGAACGAT TGTACCAAAT GGTACACGTG TACCAGGGAC ATCTTATGTA TTAGATCCAG TAAAAGGTGC ATTTAATATT GGATGCATGA TTCGGTGGTT AGATTATAAC GATACATGGC TTGCGGCAGA ATGGGGACAT CCATCAGATA ATTTAGGAGG CATTTTAGCT GTTGCAGATT ATATGAGTCG CGTTCGCATT TCGGAAGGAA AAGAACCTTT AAAAGTAAAA GATATACTGG AAATGATGAT TAAAGCTCAT GAGATTCAAG GTGTCCTTGC ATTAGAAAAT AGCTTAAATC GCGTCGGTCT AGATCATGTC TTATATGTAA AAGTGGCAAC AACGGCCGTT GTTACGAAAA TGCTTGGTGG TACACGCGAG GAAATCTTTA ACGCACTTTC TCACGCATGG ATTGATAATT CTAGCCTTCG TACATATCGT CACGCTCCAA ATACAGGTTC TCGTAAGTCT TGGGCAGCTG GGGATGCAAC GAGTCGCGGT GTTCACCTTG CTCTTACTGC ATTAAAAGGA GAGATGGGAT ATCCAACAGC ATTATCTGCA CCAGGATGGG GATTCCAAGA TGTACTATTT AATAAACAAG AGTTAAAACT AGCAAGATCG TTAGATTCTT ATGTCATGGA AAATGTATTA TTTAAAGTAT CCTATCCAGC AGAATTCCAT GCGCAAACTG CAGCTGAATG TGCAGTGAAA TTACATCCAG AAGTGAAGGG TCGATTAGAT GAAATTGATC GTATTACGAT TACGACACAT GAGTCAGCAA TTCGCATTAT TGATAAAGAA GGACCATTAA ATAACCCAGC TGATCGCGAT CATTGCTTGC AATATATTAC TGCAATTGGC TTATTAAAAG GGGATATCGT TGCGGATGAT TATGAGGATG AAGCAGCTTC TAATCCTCGT GTAGATGAAT TACGAAATAA GATGGTTGTT GTAGAAAATA AACAATATAG TTTGGATTAC CTTGATCCGA ACAAGCGCTC AATCGCCAAT GCTGTACAAG TTCATTTTAA AGATGGTACA GCGACAGAAA ATGTTGAATG TGAATATCCA CTAGGACACC GTTTCCGTCG TGATGAAGCG ATTCCAAAGA TTATACAGAA GTTTTCTGCC AATATCGCTG GTCATTACTC TAATAAGCAA CAAGAAAAAA TACATGAAGT ATGTTTGAAT GAAGAAAAAT TAGAAAATAT GAATGTAAAT GAATTTGTAG ATCTTTTCTT AATATAG
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Protein sequence | MIKTNEIKQK DAILEEITDY VLNKEVTSVE AFSTARYVLL DTLGCGILAL QYPECTKLLG PVVPGTIVPN GTRVPGTSYV LDPVKGAFNI GCMIRWLDYN DTWLAAEWGH PSDNLGGILA VADYMSRVRI SEGKEPLKVK DILEMMIKAH EIQGVLALEN SLNRVGLDHV LYVKVATTAV VTKMLGGTRE EIFNALSHAW IDNSSLRTYR HAPNTGSRKS WAAGDATSRG VHLALTALKG EMGYPTALSA PGWGFQDVLF NKQELKLARS LDSYVMENVL FKVSYPAEFH AQTAAECAVK LHPEVKGRLD EIDRITITTH ESAIRIIDKE GPLNNPADRD HCLQYITAIG LLKGDIVADD YEDEAASNPR VDELRNKMVV VENKQYSLDY LDPNKRSIAN AVQVHFKDGT ATENVECEYP LGHRFRRDEA IPKIIQKFSA NIAGHYSNKQ QEKIHEVCLN EEKLENMNVN EFVDLFLI
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