Gene Bcer98_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1725 
SymbolprpD 
ID5344147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1834093 
End bp1835529 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content38% 
IMG OID640839296 
Product2-methylcitrate dehydratase 
Protein accessionYP_001375022 
Protein GI152975505 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID[TIGR02330] 2-methylcitrate dehydratase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA CAAATGAAAT TAAACAAAAA GATGCAATTT TAGAAGAGAT TACGGACTAT 
GTATTAAATA AAGAGGTAAC AAGTGTAGAA GCATTCAGCA CCGCACGTTA TGTGCTACTT
GATACACTTG GATGCGGTAT CTTAGCATTA CAATATCCAG AGTGTACGAA ATTACTTGGA
CCGGTTGTAC CAGGAACGAT TGTACCAAAT GGTACACGTG TACCAGGGAC ATCTTATGTA
TTAGATCCAG TAAAAGGTGC ATTTAATATT GGATGCATGA TTCGGTGGTT AGATTATAAC
GATACATGGC TTGCGGCAGA ATGGGGACAT CCATCAGATA ATTTAGGAGG CATTTTAGCT
GTTGCAGATT ATATGAGTCG CGTTCGCATT TCGGAAGGAA AAGAACCTTT AAAAGTAAAA
GATATACTGG AAATGATGAT TAAAGCTCAT GAGATTCAAG GTGTCCTTGC ATTAGAAAAT
AGCTTAAATC GCGTCGGTCT AGATCATGTC TTATATGTAA AAGTGGCAAC AACGGCCGTT
GTTACGAAAA TGCTTGGTGG TACACGCGAG GAAATCTTTA ACGCACTTTC TCACGCATGG
ATTGATAATT CTAGCCTTCG TACATATCGT CACGCTCCAA ATACAGGTTC TCGTAAGTCT
TGGGCAGCTG GGGATGCAAC GAGTCGCGGT GTTCACCTTG CTCTTACTGC ATTAAAAGGA
GAGATGGGAT ATCCAACAGC ATTATCTGCA CCAGGATGGG GATTCCAAGA TGTACTATTT
AATAAACAAG AGTTAAAACT AGCAAGATCG TTAGATTCTT ATGTCATGGA AAATGTATTA
TTTAAAGTAT CCTATCCAGC AGAATTCCAT GCGCAAACTG CAGCTGAATG TGCAGTGAAA
TTACATCCAG AAGTGAAGGG TCGATTAGAT GAAATTGATC GTATTACGAT TACGACACAT
GAGTCAGCAA TTCGCATTAT TGATAAAGAA GGACCATTAA ATAACCCAGC TGATCGCGAT
CATTGCTTGC AATATATTAC TGCAATTGGC TTATTAAAAG GGGATATCGT TGCGGATGAT
TATGAGGATG AAGCAGCTTC TAATCCTCGT GTAGATGAAT TACGAAATAA GATGGTTGTT
GTAGAAAATA AACAATATAG TTTGGATTAC CTTGATCCGA ACAAGCGCTC AATCGCCAAT
GCTGTACAAG TTCATTTTAA AGATGGTACA GCGACAGAAA ATGTTGAATG TGAATATCCA
CTAGGACACC GTTTCCGTCG TGATGAAGCG ATTCCAAAGA TTATACAGAA GTTTTCTGCC
AATATCGCTG GTCATTACTC TAATAAGCAA CAAGAAAAAA TACATGAAGT ATGTTTGAAT
GAAGAAAAAT TAGAAAATAT GAATGTAAAT GAATTTGTAG ATCTTTTCTT AATATAG
 
Protein sequence
MIKTNEIKQK DAILEEITDY VLNKEVTSVE AFSTARYVLL DTLGCGILAL QYPECTKLLG 
PVVPGTIVPN GTRVPGTSYV LDPVKGAFNI GCMIRWLDYN DTWLAAEWGH PSDNLGGILA
VADYMSRVRI SEGKEPLKVK DILEMMIKAH EIQGVLALEN SLNRVGLDHV LYVKVATTAV
VTKMLGGTRE EIFNALSHAW IDNSSLRTYR HAPNTGSRKS WAAGDATSRG VHLALTALKG
EMGYPTALSA PGWGFQDVLF NKQELKLARS LDSYVMENVL FKVSYPAEFH AQTAAECAVK
LHPEVKGRLD EIDRITITTH ESAIRIIDKE GPLNNPADRD HCLQYITAIG LLKGDIVADD
YEDEAASNPR VDELRNKMVV VENKQYSLDY LDPNKRSIAN AVQVHFKDGT ATENVECEYP
LGHRFRRDEA IPKIIQKFSA NIAGHYSNKQ QEKIHEVCLN EEKLENMNVN EFVDLFLI