| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1687 |
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| Symbol | |
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| ID | 5346622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | + |
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| Start bp | 1793692 |
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| End bp | 1795077 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640839263 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001374989 |
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| Protein GI | 152975472 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGC TAGCTGTTTC TACACAAGAA GTCATTGAAG CGATTTTGAG CAGTATTGAT
GAAGCAATTC ATGCTGTAGA TGAAAATGGA ATTACCATTT TTTATAATGA TGTTGCAGCG
AAACATGATG GTTCAAAAAT TGAGAATGTA CTCGGAAAGC ATTTATTAGA GGCATTTCCA
TCGTTATCTC GAGAAACGAG TACACTTATG AAAGTTTTAC ATACAAAAAA GCCTATCGTT
CATCAAGTGC AGCGTTATCA AAATTTAAAA GGTGAGGATG TATGTACGGT TAATACGACT
TTACCTATTT TCATAGAAGG AAGTATTGCT GGAGCGGTTG AAATCGCAAA GGATTATACA
ACGATTCAAA AATTGACAGA TACAATTGTT GATTTACAGT CAAAAATGAA GCGTTCTTCT
AAACGAAAAA TAACGAAAAA ACATATTGCG TTTAATACAA TCGTGACGAA TGACACTCGC
TTTCGTCAAA CGAAAGAGTT AGCACAAAAG GTAGCTCCAA CAGATGCCAA TGTTTTAATA
TACGGCGAAA CAGGCACAGG AAAAGAATTA TTTGTTCAGG CAATTCATGA AGCTTCAAAA
AGAAAAAACA AACCGTTTAT TGCACAAAAT TGTGCAGCGC TCCCAGAATC ACTGTTAGAA
AGTTTATTAT TTGGAACGAC AAAAGGTAGT TATACGGGAG CTATTGAGCG TGCGGGGTTA
TTTGAGCTTG CAGATGGAGG GACATTATTT TTAGATGAGT TAAACTCGAT GCCCCTTGAT
CTGCAAGCAA AAATGCTTCG CGTTTTAGAA GACGGGGTCA TACGCCGAAT AGGTGATAAT
AAGACAAGAA AAGTAGATGT ACGTGTCATT ACTGCAATGA ATCAGCCTCC AGAAGTCTGC
TTGCGCGAAA ATAAGATTCG TACGGATTTG TATTATAGAT TGAATGTATT CTCTCTCTAT
ATTCCACCAC TTCGTGAGCG AATAGAAGAT GTTTTACTGC TGGCATCTTA TTTTTTAAAA
CAATATAACA AGGAATATAA AAAGGCTGTA TTTGAGATTA ACGATGATGC AAAAGAGAGA
TTATTATCGT ATCATTGGCC AGGAAATGTA AGAGAACTAA AGCATACGAT TGAACATGCT
GTGATTCTTG CAGAAGGGCA TTCGCTAACA GCTTGTTGTT TACCCCGAAT ATTCCAGAAA
GAAAACAGGC AGGAGAAGAA AAAGATATTG CCTTTACGCG AGGCGTTGTC TCAAATGGAG
AAGGAATTAA TTCATCAAGC TCTAATAGAA ACGGAGGGGA ATATATTACA AGCTGCTAAA
TTACTTAGTA TTCCAAGACA AACTTTGCAG TATAAGTTAA ATAAATATAA AAAAAACGCC
GAATAA
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| Protein sequence | MTLLAVSTQE VIEAILSSID EAIHAVDENG ITIFYNDVAA KHDGSKIENV LGKHLLEAFP
SLSRETSTLM KVLHTKKPIV HQVQRYQNLK GEDVCTVNTT LPIFIEGSIA GAVEIAKDYT
TIQKLTDTIV DLQSKMKRSS KRKITKKHIA FNTIVTNDTR FRQTKELAQK VAPTDANVLI
YGETGTGKEL FVQAIHEASK RKNKPFIAQN CAALPESLLE SLLFGTTKGS YTGAIERAGL
FELADGGTLF LDELNSMPLD LQAKMLRVLE DGVIRRIGDN KTRKVDVRVI TAMNQPPEVC
LRENKIRTDL YYRLNVFSLY IPPLRERIED VLLLASYFLK QYNKEYKKAV FEINDDAKER
LLSYHWPGNV RELKHTIEHA VILAEGHSLT ACCLPRIFQK ENRQEKKKIL PLREALSQME
KELIHQALIE TEGNILQAAK LLSIPRQTLQ YKLNKYKKNA E
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