Gene Bcer98_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1635 
Symbol 
ID5347092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1739797 
End bp1740996 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content32% 
IMG OID640839213 
ProductABC-2 type transport system permease protein 
Protein accessionYP_001374939 
Protein GI152975422 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4473] Predicted ABC-type exoprotein transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00107608 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAG AACAATTTAA GAAACGATTA TATAGCGAAT TGCATAGAAA ATGGAAATCG 
ATACGCTCTG TGACAGATTG GACAGTTGCA TTATATTTAA TTATTCCAGC ATTTATATTT
TGTGGAATCT ATTATCGGTC GCTATGGACA AGAGAAATAG CAATGGAAGA GACTACTTAT
TTTCTGCTTG GTGTATTTAT GTTTTATTGC ATTATCTATT CGAGAGGAGT ACGATCGTTT
TTGGAACGGG CGGATTGTTT ATTTTTTATT CAATATCCAG TACATATGCA AAAATTAATG
CGATATGGCA TGTTATATAC GTTTGTTCGG ATTAGTATAA CAAATGTTAT CTTAATCATA
TTTATGTTAC CGCTATGTAT GAAAAATATA GGAGCATCAC CTTTACAAAT TGTATTAGTA
TGGGGATTTT GTACTGTTTT TCGATTTATG TTGTCATTAT TAGTACGGTA TATAAATGTA
TGTATTGGGA AACGATGGGG CTTATGGATG GTTAGTAGTT TGCTATTTTT TATTTGTTTC
ATTTATCTTG GATGCGGCAT ATTTTTTATT TTAAAAAGCG CTGTTTATTC CATTATATTT
ATTATAGTAC CAGTTTTGAT TAGCGTAGCA TGCATAAAAC AAAAAGCGAA TTATAAGAAG
TACTTTTTTA AAGAAATTGA GAAAGAAAAG GAAGAAAGTA TGCGCTGGAC GAGGGGAATT
ATGCAAGTTG GCGGGCATGT GACAAATCCG AGCAGTTCGA GCAAAAAGCC GTGGTTGTTT
CCTCGTTCTA AAAAATTTTT AGGAAAAGAA TCTGATGCAC GTATTGTAGA ATCTTTTTTA
AAAGAATTTT TTCGTACCGG AAGTTCTTTG AGGTTTTATG GGCAGATTGT TTTTATAAGT
ACAATTAGTA TAATGAGAAC ACCGTGGTGG ATTACAATCA TCATTCTTAT CTTTGCATTG
TTTGCTATTT TGCATTACTC ACATGATTAT TGGCATGAAT TTACGAAGAA AATGTTTCTT
CATTTATACT GTGAAGAGGG CAAAGTATTA TTGCTAAAAT GGAGAGCGAC GCAGTATTTA
TTGCTTCCAG CAATTTTGAT TTATGCAACA GTGGTCCTTG CTCAATTTTA TCTATTACCA
GCAATTGTTG TAGGAATTTT AATTGCCGTC ATCGTAGGTT GGATTCTATT TTTGCCATAG
 
Protein sequence
MIKEQFKKRL YSELHRKWKS IRSVTDWTVA LYLIIPAFIF CGIYYRSLWT REIAMEETTY 
FLLGVFMFYC IIYSRGVRSF LERADCLFFI QYPVHMQKLM RYGMLYTFVR ISITNVILII
FMLPLCMKNI GASPLQIVLV WGFCTVFRFM LSLLVRYINV CIGKRWGLWM VSSLLFFICF
IYLGCGIFFI LKSAVYSIIF IIVPVLISVA CIKQKANYKK YFFKEIEKEK EESMRWTRGI
MQVGGHVTNP SSSSKKPWLF PRSKKFLGKE SDARIVESFL KEFFRTGSSL RFYGQIVFIS
TISIMRTPWW ITIIILIFAL FAILHYSHDY WHEFTKKMFL HLYCEEGKVL LLKWRATQYL
LLPAILIYAT VVLAQFYLLP AIVVGILIAV IVGWILFLP