| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1479 |
|---|
| Symbol | |
|---|
| ID | 5345576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 1588033 |
|---|
| End bp | 1588932 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640839064 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001374790 |
|---|
| Protein GI | 152975273 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0993365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAAGA CAGCACCATT AAATTGTAAA AAAACAAAGA GTTTTACAGG GGAGGAGAGT
ATGTTGAGTA TTTTTCAACA TATAAAAACG TATCAATATT TTCCATTTCA GCCTGAGTTT
GAAGGGATGG CAGACTATTA TACAGAACAT CGAGAAAAAA ATATATGGAA TCAAACAGTA
TTATTATTTT ATCAATTTCG TCTAAAAAAA GATTTGCATC ATGCTGTTTC AGTGGTTCCT
GATGGGTGTA TAGATATATT ATTCGGTTGT AATGAACAGG ATTGTTTTGC AAATATATGT
GGAAGTGTCA TTCGTAGTCG AATGATTCAT CTGCAAGCTG GCAGTGAATA CTTTGGTGTA
AGGTTCCTGC CATATCAAGA GGTACTTCGT TCAAACTATA TGGTAAAAGA AATAGTCGAT
AAAGAAGTAC CTTTAATTGA TATGATTTCT ATTCAACATA CAACTATAGA AAAAATAATA
CTTGCAGAAG GGTTTCAAGA AAGAGTGGGA TTGTTTAAAG AGTTAATTGG TAAAGTTGTT
TTTCCCTCAG ACGGTTCAAT GAACATAATA GGACAAGTGC TAAATAAAAT TTATGAATCA
AAAGGAAATA TGAACATAAG TCAGTTGGCG GGTAAGGTGG GATATTCAAC GAGATATATA
CGAAAGCAAT TTAAAGAATC TATTGGAATC TCTCCAAAAC GATTTAGTCA AATTGTAAGA
TATCAATCTG CTTTAAATAT GTTGCTTAAA ATGAAGAACT TTACCATTTG GGATATCATC
AATGAAAATG GTTATTATGA TCAAGCGCAT TTCATTCATG AATTTAAAAG TTTTGGCTCG
TTAACTCCAA GGGAATATAC TGAAAAGTTT TTTGGAAAGT TACGTTGTGA CGTAGAGTAG
|
|---|
| Protein sequence | MCKTAPLNCK KTKSFTGEES MLSIFQHIKT YQYFPFQPEF EGMADYYTEH REKNIWNQTV
LLFYQFRLKK DLHHAVSVVP DGCIDILFGC NEQDCFANIC GSVIRSRMIH LQAGSEYFGV
RFLPYQEVLR SNYMVKEIVD KEVPLIDMIS IQHTTIEKII LAEGFQERVG LFKELIGKVV
FPSDGSMNII GQVLNKIYES KGNMNISQLA GKVGYSTRYI RKQFKESIGI SPKRFSQIVR
YQSALNMLLK MKNFTIWDII NENGYYDQAH FIHEFKSFGS LTPREYTEKF FGKLRCDVE
|
|---|
| |