| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1444 |
|---|
| Symbol | |
|---|
| ID | 5344055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 1546884 |
|---|
| End bp | 1547783 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640839032 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001374758 |
|---|
| Protein GI | 152975241 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.224106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC AGTATATTTA TATGAATGGG GAATTAGTAG AGAAGGAAAA GGCTGTTGTT
TCGGTATATG ATCATGGGTT TTTATATGGA GACGGTGTAT TTGAAGGAAT TCGTAGTTAC
GGTGGAAATG TCTTTTGTTT AAAAGAGCAT GTAAAGCGGT TATATGAATC TGCAAAATCT
ATTTTGCTCA CGATTCCAAT GACAGTGGAA GAAATGGAAA AAGCGGTTGT ACAGACGTTA
CAAAAAAATG GATATGCCGA TGCATATATT CGACTAATTG TTTCAAGAGG AAAGGGGGAT
TTAGGACTGG ATCCAAGAAG TTGCGAAAAG CCAAGTGTCA TCATTATTGC AGAGCAATTA
AAATTATTTC CTCAAGAATT TTATGATAAT GGTCTGAGCG TTGTATCGGT TGCATCTCGC
CGGAATATGC CAGATGCATT AGATCCACGT ATTAAGTCAA TGAATTATTT AAATAACGTA
CTAGTGAAAA TTGAAGCAGC GCAAGCGGGT GCACTAGAAG CACTTATGTT AAATCAACAA
GGATATGTTT GTGAAGGGTC AGGAGACAAT GTTTTTGTAG TGAAAGATGG AAAAGTAGTA
ACACCGCCTT CTTACTTAGG GGCATTGGAA GGAGTGACTC GCAATAGCGT GATTGAACTT
TGTGACAAAT TGGGGATTCC ATGTGAAGAA AGACCGTTTA CCCGTCACGA TGTATATGTA
GCGGATGAAG TGTTTTTAAC GGGAACTGCT GCTGAATTAA TTCCAGTTGT AAAAGTTGAT
GCAAGAGAAA TTGGAGATGG AAAGCCTGGA GAGGTAACAA AACAATTAAC CGAAGCGTTT
AAACGGTTAA CGAGAGAACG AGGAGTACGT GTGCCAGGAC TAGCAGAGAG TTTGGCGTAA
|
|---|
| Protein sequence | MKKQYIYMNG ELVEKEKAVV SVYDHGFLYG DGVFEGIRSY GGNVFCLKEH VKRLYESAKS
ILLTIPMTVE EMEKAVVQTL QKNGYADAYI RLIVSRGKGD LGLDPRSCEK PSVIIIAEQL
KLFPQEFYDN GLSVVSVASR RNMPDALDPR IKSMNYLNNV LVKIEAAQAG ALEALMLNQQ
GYVCEGSGDN VFVVKDGKVV TPPSYLGALE GVTRNSVIEL CDKLGIPCEE RPFTRHDVYV
ADEVFLTGTA AELIPVVKVD AREIGDGKPG EVTKQLTEAF KRLTRERGVR VPGLAESLA
|
|---|
| |