| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1383 |
|---|
| Symbol | fliR |
|---|
| ID | 5344407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 1482724 |
|---|
| End bp | 1483485 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640838973 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_001374699 |
|---|
| Protein GI | 152975182 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0171793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGG AGTTATGGGC AGCTACATTT TTTGCATTTT GCCGTATTAC GTCATTTTTA
TATTTTTTAC CGTTTTTTTC AGGGCGTTCT GTTCCAGCGA TGGCAAAGGT TACATTTGGA
TTAGGGCTTT CGATTACAGT GGCTGACAAA GTGGATGTTT CTCATATTCA AACCGTATGG
GATGTAGTAG CATACGCCGG AACACAAATT GTAATCGGTT TAGCGCTGTC AAAAATCGTC
GAAATACTGT GGAACATTCC GAAAATGGCA GGTCATATTT TAGATTTTGA TATTGGATTG
TCACAGGCGA GTTTATTTGA TGTGAATGCC GGGGCACAAT CGACTTTATT ATCAACGATT
TTTGATATAT TTTTCCTCAT TATTTTTATT TCATTAGGCG GCATTGATTA TTTCGTTGCC
ACGATTTTAA AGTCGTTTCA ATATACAGAG GCGATTTCAA AATTGCTCAC AACAAACTTT
TTAGATAGTT TGCTAGCGAC ATTATTATTT GCGATTACAT CAGCGGTAGA AATTGTTCTT
CCGCTCATGG GGAGCTTGTT TATTATTAAC TTTGTTCTCA TTTTAATTGC AAAGAACGCA
CCGCAATTAA ACGTCTTTAT GAACGCATAT GTTATTAAAA TTACGTGCGG GATTTTATTT
ATTGCGATGA GTGTACCAAT GCTCGGCTAT GTTTTTAAAA ATATGACGGA TACGTTGCTT
GAGGAATATA CAAAACTATT TAACTTTTTC TTAACAAAGT AG
|
|---|
| Protein sequence | MNMELWAATF FAFCRITSFL YFLPFFSGRS VPAMAKVTFG LGLSITVADK VDVSHIQTVW
DVVAYAGTQI VIGLALSKIV EILWNIPKMA GHILDFDIGL SQASLFDVNA GAQSTLLSTI
FDIFFLIIFI SLGGIDYFVA TILKSFQYTE AISKLLTTNF LDSLLATLLF AITSAVEIVL
PLMGSLFIIN FVLILIAKNA PQLNVFMNAY VIKITCGILF IAMSVPMLGY VFKNMTDTLL
EEYTKLFNFF LTK
|
|---|
| |