Gene Bcer98_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1222 
Symbol 
ID5345079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand+ 
Start bp1334855 
End bp1335904 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content40% 
IMG OID640838812 
Productisopentenyl pyrophosphate isomerase 
Protein accessionYP_001374539 
Protein GI152975022 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.050078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAGAG AGAAACGTAA ATTAGAACAT ATTGAATACG CTCTTTCCAC TGGACAGTCT 
CGTACACATG GCTTTTGTGA TATTGAATTC GTCCATAAAA GCTTACCAAA TTCAAGTTTT 
GAAAGTGTTA CATGTGAAAC TAAAATCGGC GAACTTTCAC TAAGTTCGCC GATTTTTATC 
AATGCGATGA CTGGTGGTGG AGGAGAGCGT ACATTACACA TTAATGAACA ACTGGCCTAT 
GTAGCAAAAC ATCATCACCT TGCGATGGCC GTCGGTTCCC AAATGGCAGC GTTAAAAGAG 
AAAAGAGAAG TAGACTCGTA TCGAATTGTA AGAAGAGTAA ACCCGAATGG TATTGTGTTT 
GCAAACTTAG GAAGCGAAGC AACAGTTGAA CAGGCAAAAT GTGCTGTTGA TATGATTGAA 
GCGAATGCTT TGCAGATTCA TTTAAATGTG ATTCAAGAAT TAACGATGCC AGAAGGAGAT 
CGAGATTTTA AAGGTGTATT AAAACGAATT GAAAACATTG TCCTTACTTC TGAAGTTCCT 
GTTATTGTGA AGGAAGTAGG ATTTGGGATG AGTAAAGAAA CGGTTCAGCA GTTAGCTAAC 
ATAGGTGTAA CAGCGATAGA TATTGGTGGT CAAGGCGGTA CAAACTTTGC TGCTGTAGAA 
AATGAAAGAA GAAACCGTAT GCTCTCTTAC TTTAATGATT GGGGCATTCA AACAGCTTCT 
TCTATAATAG AAGCATCCTC TACAAACAAT ACCCTCTCTC TCATTGCATC AGGTGGAATC 
CAAACGGCAC TTGATGTAGC CAAAGCGATT GCTTTAGGAG CACAGGCAAC GGCTTTTGCG 
GGCTATTTTT TGCGGATATT GATGAATGAA GGCATGGATA CATTAATCGA AGAAGTAGAA 
TTGTTACATA CCGATTTACG ATTTATCATG ACAGCTCTTG GGGCGAAGAA CATTTTAGAA 
CTCCAGCAAG TTCCTCTTGT TGTGAAAGGT GATACATATC ATTGGTTAAC GCAGCGTGGC 
ATTGATACGA TGTATTATAG TCAGAGGTAA
 
Protein sequence
MAREKRKLEH IEYALSTGQS RTHGFCDIEF VHKSLPNSSF ESVTCETKIG ELSLSSPIFI 
NAMTGGGGER TLHINEQLAY VAKHHHLAMA VGSQMAALKE KREVDSYRIV RRVNPNGIVF 
ANLGSEATVE QAKCAVDMIE ANALQIHLNV IQELTMPEGD RDFKGVLKRI ENIVLTSEVP 
VIVKEVGFGM SKETVQQLAN IGVTAIDIGG QGGTNFAAVE NERRNRMLSY FNDWGIQTAS 
SIIEASSTNN TLSLIASGGI QTALDVAKAI ALGAQATAFA GYFLRILMNE GMDTLIEEVE 
LLHTDLRFIM TALGAKNILE LQQVPLVVKG DTYHWLTQRG IDTMYYSQR