Gene Bcer98_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0543 
Symbol 
ID5345142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp620934 
End bp621578 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content33% 
IMG OID640838136 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001373887 
Protein GI152974370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC AAGGAGCTTA TACTGGAGAT CATATTGTTT TCCTATTAAA AGGATTACTT 
GTCACATTAG AAATCGCCAT TATTTCTATT TTCCTTAGTT TTCTTATCGG TAGTATAGTG
GGAACAGTAC GATATACGAA AATACCGATT CTATCGCAAA TATTCGCCGT CATTGTTGAA
ATAATTCGTA ACTTACCATT GCTTTTAATT ATTTTCTTTA CTTATTTTGC ACTTCCAGAA
GCTGGGTTGA AATTAGAGAT TAAAACAGCA GCGATTGTTG CTTTAACAAT TTTTGAGGCA
GCGATGATTT CAGAGATTGT TCGCAGCGGC TTATTATCGA TTGAGAAAGG GCAAATAGAA
GCAGGGCGAG CTTCAGGATT GTCATATATA CAAACACTTT GGTACATTAT TTTACCACAA
GCGTTGAGAC GTATGGTACC ACCGCTAGTG AGCCAATTTA TATCTTTATT AAAGGATACA
TCATTAGCAG TTGTCATTTC ATTACCGGAG CTTATGCATA ATGCCCAAAT TATTAATGGA
CAAAATGTGA ATTACATGAT TCCTACATTT GTATTAGTAG CTTGTATATA TTTTGTTGTA
AATTATCAAT TGTCAATTTT ATCAAGAAAA TTAGAACATC ATTAA
 
Protein sequence
MDFQGAYTGD HIVFLLKGLL VTLEIAIISI FLSFLIGSIV GTVRYTKIPI LSQIFAVIVE 
IIRNLPLLLI IFFTYFALPE AGLKLEIKTA AIVALTIFEA AMISEIVRSG LLSIEKGQIE
AGRASGLSYI QTLWYIILPQ ALRRMVPPLV SQFISLLKDT SLAVVISLPE LMHNAQIING
QNVNYMIPTF VLVACIYFVV NYQLSILSRK LEHH