Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_0543 |
Symbol | |
ID | 5345142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 620934 |
End bp | 621578 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640838136 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001373887 |
Protein GI | 152974370 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTC AAGGAGCTTA TACTGGAGAT CATATTGTTT TCCTATTAAA AGGATTACTT GTCACATTAG AAATCGCCAT TATTTCTATT TTCCTTAGTT TTCTTATCGG TAGTATAGTG GGAACAGTAC GATATACGAA AATACCGATT CTATCGCAAA TATTCGCCGT CATTGTTGAA ATAATTCGTA ACTTACCATT GCTTTTAATT ATTTTCTTTA CTTATTTTGC ACTTCCAGAA GCTGGGTTGA AATTAGAGAT TAAAACAGCA GCGATTGTTG CTTTAACAAT TTTTGAGGCA GCGATGATTT CAGAGATTGT TCGCAGCGGC TTATTATCGA TTGAGAAAGG GCAAATAGAA GCAGGGCGAG CTTCAGGATT GTCATATATA CAAACACTTT GGTACATTAT TTTACCACAA GCGTTGAGAC GTATGGTACC ACCGCTAGTG AGCCAATTTA TATCTTTATT AAAGGATACA TCATTAGCAG TTGTCATTTC ATTACCGGAG CTTATGCATA ATGCCCAAAT TATTAATGGA CAAAATGTGA ATTACATGAT TCCTACATTT GTATTAGTAG CTTGTATATA TTTTGTTGTA AATTATCAAT TGTCAATTTT ATCAAGAAAA TTAGAACATC ATTAA
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Protein sequence | MDFQGAYTGD HIVFLLKGLL VTLEIAIISI FLSFLIGSIV GTVRYTKIPI LSQIFAVIVE IIRNLPLLLI IFFTYFALPE AGLKLEIKTA AIVALTIFEA AMISEIVRSG LLSIEKGQIE AGRASGLSYI QTLWYIILPQ ALRRMVPPLV SQFISLLKDT SLAVVISLPE LMHNAQIING QNVNYMIPTF VLVACIYFVV NYQLSILSRK LEHH
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