Gene Bcer98_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0542 
Symbol 
ID5345141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp620232 
End bp620933 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content38% 
IMG OID640838135 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001373886 
Protein GI152974369 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGG CTCATCCTCT TCTTATAAAG AAAGAGGGTG GAAGTTTGCC TGACTTTTCA 
ATTTTGACAA ATAACATAGA TTTGTATTTG GAGGGATTTA AATATACGTT ATTGTCCAGT
GTAATTGCCT TGATTGGTAG TTTTCTTCTC GGTGTTATTA TAGCCGTTAT GCGAATTACG
CCAATTCGAG CGTTAAATTG GATTGGTACA GCGTATGTAG AATTTGTTCG AAATATCCCC
ATCGTTTTAA TTGCATTCGC CTTTTATTTT GCCTTTCCAG TCGTTGGTGT TACATTAAGT
GGGTTTGTTG CAGGAACAGC AGCGCTTACT ATATATACAG CGTCTTTTAT TGCAGAAGCG
ATTCGAGCCG GAATTTTATC TGTTGCAAAA GGACAGATGG AAGCAGCACG TTCTTCTGGT
TTAACATACG TACAAGCGAT GTATTATGTT GTGTTACCAC AAGCTATTAA AATCGTCATT
CCGCCGCTAG GCAACCAATT TCTTAATTTA GTAAAAAACT CTTCGATTCT TGGAATTATT
GCCGGAGCAG ATTTAATGTA TCAAGGAGAT TTAATTTCAA CGAGAACATT TGTCACATTT
GATGTGTATA TATTTGTTGG GATGTTTTAC TTACTTTTAA CTGTACCGCT TAGCATGCTT
GTGCGTTACT TGGAAAAACG CTTGGCGAAA GGAGCGGTAT AG
 
Protein sequence
MRLAHPLLIK KEGGSLPDFS ILTNNIDLYL EGFKYTLLSS VIALIGSFLL GVIIAVMRIT 
PIRALNWIGT AYVEFVRNIP IVLIAFAFYF AFPVVGVTLS GFVAGTAALT IYTASFIAEA
IRAGILSVAK GQMEAARSSG LTYVQAMYYV VLPQAIKIVI PPLGNQFLNL VKNSSILGII
AGADLMYQGD LISTRTFVTF DVYIFVGMFY LLLTVPLSML VRYLEKRLAK GAV