Gene Bcer98_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0377 
Symbol 
ID5344854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp434280 
End bp435521 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content35% 
IMG OID640837960 
Productmajor facilitator transporter 
Protein accessionYP_001373730 
Protein GI152974213 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TATTTAGTAA TCGCGCTTTT TTATTAGTCA CGATATCCGA TATTTTGCAA 
CAACTTGCTA TTTGGATAAG AAATATGGCA CTTTTATATT TTGTTATGGA AAGGACGAAC
AACGATCCTA TCTCAGTTTC ATTATTATCG GTTATGGAGT ATGCACCTAT TTTTATTTTT
TCATTTGTCG GCGGTGCACT AGCTGATCGG TGGAATCCGA ACCGAACAAT GGTAGCTGGC
GATATGTTAA GTGTATGTTC CATTATAGGT ATTATTGTAT TGTTAAAAAT GGATTATTGG
CAGGCCATAT TTTTTGCAAC GCTTGTCTCA GCGATTGTTG GACAATTTTC TCAGCCTTCA
TCATCAAAAA TTTTTAAGCG TTATGTAGAA GAAAAATATG TTTCAAATGC GATTGCATTC
AATCAAACGT TACAGTCATT GTTTCTCATT TTTGGTCCAG TTATAGGGTC TGTTGTTTAT
ACACAATTAG GGGTGTTTAC AGCGTTATAT AGCTTAATTG GACTCTTTTT GTTATCTGCC
CTGGCATTGT CCTTTTTACC AATATGGATT GAAAAAGAGG AAAAAGTAGA GCGTACATTA
GGAAGCGATA TAAAAGAAGG GTGGAAATTC GTTCTTCAAA CGAAAAATGT AAGCATGATT
ACAGTTGCTT TTGCGATTAT CGGTTTAGCG GTTGGATTAA CGAATCCATT AGAAGTTTTT
CTCGTTATTG AACGATTAGG ATTAAATAAG GAAGCTGTTC AATATTTAGC AGTTGCCGAT
GGAATAGGAA TGCTAATTGG AGGTGGTGTT GCTGCTATAT TTGCTTCCAA GGTACATCCG
AAGAAAATGT TTGTGTTTGG TATGTTTGTA TTAGCTCTAT CATTTCTCGT AGAGGGAGTA
TCAACATCAT TTTGGTTGAC TAGCTTCATG AGGTTTGGAA CGGGCATTTG TTTAGCTTGT
GTTAATATTG TTGTTGGCAC ACTTATGATT CAGCTTGTAC CAGAAAATAT GGTTGGGCGT
GTAAATGGTA CCATTCTTCC AATTTTTATG GGAGCTATGC TAATGGGGAA TGCATTTGCT
GGAGGAGTGA AAGAAGTGAC TTCAATCATC GTTGTCTTTT GTATAGCAAT GCTACTTAGT
TTAATGGCAA TTTTACCTAT TTTACGTATG AATATAGGTA GTGCGAAAGT GACAAATCAA
ATGGAAAGTA CAAAGCAAAA TGGTGTTAAA AGCTTTAAAT AA
 
Protein sequence
MKNLFSNRAF LLVTISDILQ QLAIWIRNMA LLYFVMERTN NDPISVSLLS VMEYAPIFIF 
SFVGGALADR WNPNRTMVAG DMLSVCSIIG IIVLLKMDYW QAIFFATLVS AIVGQFSQPS
SSKIFKRYVE EKYVSNAIAF NQTLQSLFLI FGPVIGSVVY TQLGVFTALY SLIGLFLLSA
LALSFLPIWI EKEEKVERTL GSDIKEGWKF VLQTKNVSMI TVAFAIIGLA VGLTNPLEVF
LVIERLGLNK EAVQYLAVAD GIGMLIGGGV AAIFASKVHP KKMFVFGMFV LALSFLVEGV
STSFWLTSFM RFGTGICLAC VNIVVGTLMI QLVPENMVGR VNGTILPIFM GAMLMGNAFA
GGVKEVTSII VVFCIAMLLS LMAILPILRM NIGSAKVTNQ MESTKQNGVK SFK