Gene Bcer98_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0358 
Symbol 
ID5347188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp410907 
End bp413096 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content35% 
IMG OID640837941 
ProductDNA topoisomerase III 
Protein accessionYP_001373711 
Protein GI152974194 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.89538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA GTGTAGTAAT TGCTGAGAAA CCATCAGTTG CACGGGATAT CGCAAAAGTA 
TTAAAGTGTA CAAAAAAAGG AAATGGATTT TTAGAAGGGG ATAAATATAT CGTGACTTGG
GCTCTTGGAC ACTTAGTGAC ACTTGCAGAC CCTGAGGCTT ATGATAATAA GTATAAAACA
TGGAATCTTG AAGATCTTCC TATGCTTCCA GAACGTATGA AATTAGTTGT TATAAAACAA
ACGGGAAAAC AGTTTCATGC TGTGAAACAT CAACTTAGTC GAAATGATGT TAATGAGATA
ATTGTGGCTA CTGATGCAGG AAGAGAGGGA GAATTGGTTG CCCGTTGGAT TATTGAAAAA
GCAAAAGTGA AGAAACCCAT TAAACGTTTA TGGATTTCTT CTGTAACAGA CAAAGCAATT
AAAGATGGTT TTCGTAATTT AAAACCAGGT AAAACTTATG ATAATTTATA CGCCTCAGCC
GTTGCTCGTT CTGAAGCTGA TTGGTATATC GGCTTAAATG CTACTCGTGC ATTAACAACA
AAATTCAATG CTCAATTAAA CTGTGGGCGT GTGCAAACAC CAACTGTAGC TATTATTGCG
AGTCGTGAAG ATGAAATCAA AAACTTTAAA GCTCAAACAT ACTACGGTAT CGAAGCTCAA
ACAACGAATA ATTTAAAACT AACTTGGCAA GATGCAAAAG GAAATAGTCG TAGTTTTAAT
AAAGAAAAAA TTGATGGTAT CGTAAAAAGC TTAGATAAAC AAAATGCTAC TGTTGTGGAA
ATTGATAAAA AACAGAAGAA ATCATTCTCT CCTGGCCTTT ATGATTTAAC TGAATTGCAA
CGTGATGCAA ATAAAAAGTT CGGTTACTCT GCAAAAGAAA CATTAAACAT TATGCAGAAA
TTGTATGAAC AGCATAAAGT GCTAACGTAT CCTCGTACGG ATTCACGCTA CATTTCATCT
GATATCGTTG GAACACTTCC AGAGCGTCTA AAAGCATGCG GTGTAGGAGA CTATCGCTCT
TTAGCACATA AGATTTTAAA TAAGCCGATA AAATCTAATA AATCATTTGT TGATAATAGT
AAAGTAAGTG ATCATCACGC AATTATTCCA ACAGAGGGAT ATGTTAATTT CTCTGCGTTC
ACTGATAAAG AACGTAAAAT TTATGATTTA GTTGTAAAAC GTTTCTTAGC TGTTTTATTC
CCAGCATTTG AATACGAACA ACTAACATTA CGCACAAAAA TTGGGAATGA AACGTTCATT
GCGCGCGGAA AAACAATTTT ACATGCTGGT TGGAAAGAAG TATATGAAAA CCACTTTGAA
GATGATGATG TAACTGATGA CGTAAAAGAA CAACTTCTAC CTCGTATTGA AAAAGGTGAT
ACATTAACTA TAAAGTTAAT TACGCAAACA TCAGGTCAAA CAAAACCACC TGCACGATTT
AATGAAGCAA CTTTACTTTC AGCAATGGAG AACCCTACAA AATATATGGA TACGCAAAAT
AAACAACTTG CTGATACGTT AAAATCGACT GGTGGATTAG GTACTGTAGC GACACGTGCA
GATATTATCG ACAAACTTTT CAACTCTTTC TTAATTGAAA AACGTGGTAA AGATATTCAT
ATTACCTCAA AAGGTCGTCA ATTACTTGAT TTAGTACCAG AAGAATTAAA ATCACCTACA
CTAACTGGTG AGTGGGAACA AAAACTTGAG GCAATTGCAA AGGGGAAACT GAAAAAAGAA
GTATTCATTT CAGAAATGAA GAACTATACG AAAGAGATTG TTTCTGAAAT TAAATCGAGT
AATAAAAAAT ATAAACATGA CAACATTTCT ACGAAGTCTT GTCCAGACTG CGGTAAACCA
ATGCTAGAGG TAAACGGCAA AAAAGGAAAA ATGCTCGTAT GCCAAGACCG TGAATGTGGT
CACCGTAAAA ATGTATCCCG CATAACAAAT GCCCGTTGCC CGCAATGTAA GAAAAAATTA
GAGCTACGTG GTGAGGGGGC TGGTCAAATC TTTGCATGTA GATGCGGCTA CCGTGAGAAG
CTATCTACCT TCCAAGAACG CCGCAAAAAA GAATCTGGTA ACAAAGCAGA TAAACGTTTC
GTTCAAAAAT ATATGAAACA GCAGCAAAAA GAAGCAGAGC CATTAAATAA TGCATTAGCA
GAAGCATTAA AGAAATTGAA ATTTGATTAA
 
Protein sequence
MAKSVVIAEK PSVARDIAKV LKCTKKGNGF LEGDKYIVTW ALGHLVTLAD PEAYDNKYKT 
WNLEDLPMLP ERMKLVVIKQ TGKQFHAVKH QLSRNDVNEI IVATDAGREG ELVARWIIEK
AKVKKPIKRL WISSVTDKAI KDGFRNLKPG KTYDNLYASA VARSEADWYI GLNATRALTT
KFNAQLNCGR VQTPTVAIIA SREDEIKNFK AQTYYGIEAQ TTNNLKLTWQ DAKGNSRSFN
KEKIDGIVKS LDKQNATVVE IDKKQKKSFS PGLYDLTELQ RDANKKFGYS AKETLNIMQK
LYEQHKVLTY PRTDSRYISS DIVGTLPERL KACGVGDYRS LAHKILNKPI KSNKSFVDNS
KVSDHHAIIP TEGYVNFSAF TDKERKIYDL VVKRFLAVLF PAFEYEQLTL RTKIGNETFI
ARGKTILHAG WKEVYENHFE DDDVTDDVKE QLLPRIEKGD TLTIKLITQT SGQTKPPARF
NEATLLSAME NPTKYMDTQN KQLADTLKST GGLGTVATRA DIIDKLFNSF LIEKRGKDIH
ITSKGRQLLD LVPEELKSPT LTGEWEQKLE AIAKGKLKKE VFISEMKNYT KEIVSEIKSS
NKKYKHDNIS TKSCPDCGKP MLEVNGKKGK MLVCQDRECG HRKNVSRITN ARCPQCKKKL
ELRGEGAGQI FACRCGYREK LSTFQERRKK ESGNKADKRF VQKYMKQQQK EAEPLNNALA
EALKKLKFD