Gene Bcer98_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0312 
Symbol 
ID5344767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp359308 
End bp360267 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content41% 
IMG OID640837900 
Productdihydrouridine synthase DuS 
Protein accessionYP_001373670 
Protein GI152974153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATA ATTTTTGGCG TGATTTACCA CGACCATTTT TTGTACTTGC ACCAATGGAA 
GATGTGACAG ATGTTGTTTT TCGTCACGTA GTAAGTGAAG CCGGTCGACC GGATGTATTT
TTCACGGAGT TTACAAACTC GGATAGCTAT TGTCATCCAG AGGGTATGAA AAGTGTGCGT
GGCCGTTTGA TTTTTACAGA AGATGAACAG CCAATAGTGG CGCATATTTG GGGAGATAAT
CCCGAATATT TCCGTCAAAT GAGTATTGGC ATGGCAGAAC TAGGGTTTAA AGGAATCGAT
ATTAATATGG GCTGTCCTGT ACCGAATGTA GCTTCGAGAG GAAAAGGTAG TGGCCTTATT
CTGCGTCCAG ACGTCGCAGC AGAACTTATT CAAGCAGCAA AAGCAGGCGG ACTACCTGTC
AGCGTAAAAA CACGACTTGG CTTTAAGGAA GTAAATGAGT GGGAGGAGTG GTTAACGCAT
ATTTTCAAAC AGGATATTGC GAACCTTTCT ATTCATTTAC GTACAAGAGA AGAAATGAGC
CAAGTGGCTG CTCATTGGGA GTTAATTCCA GAAATCAAAA AATTACGTGA CCGTATCGCA
CCAAATACGC TCCTAACAAT CAATGGAGAC ATTCCTGACC GTCAAACCGG GCTACAGCTT
GCTGAAAAAT ACGGCATTGA TGGTGTGATG ATCGGGCGAG GTATTTTTAA AAATCCGTTT
GCGTTTGAAA AAGAGCCAAG AGAACATAGC AGTAAAGAAC ACCTTGATCT TTTAAGACTA
CAGCTTGATC TTCAAGATCA ATATGCGGAA GTACTACCAC GTTCCATCAC AGGACTTCAT
CGCTTTTTCA AAATTTATGT TAAAGGATTC CATGGAGCTG CTGAATTAAG AAATCAATTG
ATGAGCACGA AATCAACAGA TGAAGTGCGT GCATTGCTTG ATAAATTTGA ACAGAGATGA
 
Protein sequence
MIDNFWRDLP RPFFVLAPME DVTDVVFRHV VSEAGRPDVF FTEFTNSDSY CHPEGMKSVR 
GRLIFTEDEQ PIVAHIWGDN PEYFRQMSIG MAELGFKGID INMGCPVPNV ASRGKGSGLI
LRPDVAAELI QAAKAGGLPV SVKTRLGFKE VNEWEEWLTH IFKQDIANLS IHLRTREEMS
QVAAHWELIP EIKKLRDRIA PNTLLTINGD IPDRQTGLQL AEKYGIDGVM IGRGIFKNPF
AFEKEPREHS SKEHLDLLRL QLDLQDQYAE VLPRSITGLH RFFKIYVKGF HGAAELRNQL
MSTKSTDEVR ALLDKFEQR