Gene Bcer98_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0233 
Symbol 
ID5344615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp244403 
End bp245779 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content37% 
IMG OID640837795 
ProductUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 
Protein accessionYP_001373594 
Protein GI152974077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA GAACGTTAAA GCAAATCGAG AAAATGGTAA ATGGAACAGG CTTAGCAGAG 
AAATATTTTG ATATGACTGC GCAAGGTGTT TCAATTGATA CACGGAAAAT GGAAAAAGGG
AATGTATATG TGCCAATTCA AGGTGAACGT TTTGATGGTC ATTCATTTGT AGAGAAAGCA
ATAGAGAGCG GTGCTGTAGC TACACTTTGG AAAAGAGATG TACAAAACCC ACCTGCGAAT
ATGCCAGTTA TCTTTGTGGA AGATACATTG GAAGCATTGC AAATGTTAGC TAAAAACTAT
CGTGATCAAT TGAATGTAAA AGTTGTTGGG GTAACAGGAA GTAATGGTAA GACATCTACA
AAAGATATTG TGACGAGTCT TCTTGCAACT AAATTTAAAG TCCAAAAAAC AGAAGGTAAT
TTTAACAATC ATATCGGCCT ACCTCTTACG ATTTTAAATT TGGAAGAGGA TACAGAAATT
GCTGTTTTAG AAATGGGAAT GTCTAGTAGA GGAGAAATTG AATTTTTATC TAAGTTAGCT
CGTCCGAATG CAGCGATTAT TACAAACATT GGCGAAGCTC ATTTGATGGA TTTAGGTTCT
CGAGATGCAA TTGCAGAAGC GAAGCTTGAG ATTGTTACCG GATTACAAGA AGGTGGAGTA
TTTGTATATA ACGGGGATGA GCCTTTATTA ACAAATCGCG TACCGAAGAT GGATTTAGCG
GTAGAGACGA TTACATTTGG AGATGCTAGA GCGAATGATT ATTATCCAAC TTCTGTGACA
TTACAAGCAA CTGGGACGCA TTTTACAATG AACCGAGATG AAAATGTATT GTTCTATTTG
CCTGTTCTTG GGAAGCATAA TGTATATAAT GCACTTGCAT CGATGGCAAT TGCGAAATAC
TTTGGGGTGA CATGGGAAGA AATGAAACAA GGTCTAGTGA CGCTCCAAAT GACAGGAATG
CGTATGGAAG TTGTAAAAAC AAATAGCGGA TTAACAATTA TTAATGATGC GTACAATGCA
AGTCCAACTG CAATGGAAGC TGCTTTTCAT TTGATGAATG GTTTAGATGG GTTTGCTAAA
AAGATTGTTG TTCTGGGTGA TATGTTAGAA CTTGGAGATC AAGAAGTACA ATTTCATTAT
GAGGTAGGTA AGCTCATTGA TCCTGCACGA ATTTCTTATG TATTCACATA TGGTAGATTA
GGAGCTCAAA TTGCTGAAGG AGCAAAAATT AATTTCCCAA ATGAACGTGT GAAGGCGTAT
GACAATAAGG AAGAATTAGT GAAAAATCTA AAAGATATTG TAGATATGGA AGATGTCGTG
TTGGTGAAAG CATCTCGCGG GATGAAAATG GAAGAAATCA TTACAATGTT GAAATAA
 
Protein sequence
MIKRTLKQIE KMVNGTGLAE KYFDMTAQGV SIDTRKMEKG NVYVPIQGER FDGHSFVEKA 
IESGAVATLW KRDVQNPPAN MPVIFVEDTL EALQMLAKNY RDQLNVKVVG VTGSNGKTST
KDIVTSLLAT KFKVQKTEGN FNNHIGLPLT ILNLEEDTEI AVLEMGMSSR GEIEFLSKLA
RPNAAIITNI GEAHLMDLGS RDAIAEAKLE IVTGLQEGGV FVYNGDEPLL TNRVPKMDLA
VETITFGDAR ANDYYPTSVT LQATGTHFTM NRDENVLFYL PVLGKHNVYN ALASMAIAKY
FGVTWEEMKQ GLVTLQMTGM RMEVVKTNSG LTIINDAYNA SPTAMEAAFH LMNGLDGFAK
KIVVLGDMLE LGDQEVQFHY EVGKLIDPAR ISYVFTYGRL GAQIAEGAKI NFPNERVKAY
DNKEELVKNL KDIVDMEDVV LVKASRGMKM EEIITMLK