Gene Bcer98_0121 details

Gene Information

• Locus tag: Bcer98_0121
• Symbol: rpsE
• ID: 5344405
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: +
• Start bp: 135275
• End bp: 135775
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640837679
• Product: 30S ribosomal protein S5
• Protein accession: YP_001373490
• Protein GI: 152973973
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000313294
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGCA TTGACCCAAG CAAATTAGAA CTTGAAGAAC GTGTAGTTAC GATAAACCGT 
GTTGCGAAAG TTGTTAAGGG TGGTCGTCGT TTCCGCTTTG CTGCACTAGT TGTAGTTGGT 
GATAAGAACG GTCACGTTGG ATTCGGTACT GGTAAAGCTC AAGAGGTACC AGATGCTATT 
CGCAAAGCTA TCGAAGATGC TAAGAAAAAC TTAATCGAAG TACCTTTAGT TGGTACATCA 
ATTCCACACG AAATCATCGG ACATTTCGGT GCTGGTGAAG TATTCCTAAA ACCTGCTGCT 
GAAGGTACTG GGGTTATCGC TGGTGGACCA GTACGTGCGG TTCTTGAGTT AGCTGGTGTA 
CAAGATATTC TTTCTAAATC TCTTGGTTCT AACACACCAA TTAACATGAT TCGCGCTACT 
GTGAACGGAT TAAGCGAACT TAAGCGTGCT GAAGAAGTAG CAAAATTACG TGGTAAATCT 
GTAGAAGAGC TACTAGGTTA A 

 

Protein sequence

MRRIDPSKLE LEERVVTINR VAKVVKGGRR FRFAALVVVG DKNGHVGFGT GKAQEVPDAI 
RKAIEDAKKN LIEVPLVGTS IPHEIIGHFG AGEVFLKPAA EGTGVIAGGP VRAVLELAGV 
QDILSKSLGS NTPINMIRAT VNGLSELKRA EEVAKLRGKS VEELLG