Gene Bcer98_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0071 
Symbol 
ID5344292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp79710 
End bp80708 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content41% 
IMG OID640837615 
ProductnifR3 family TIM-barrel protein 
Protein accessionYP_001373441 
Protein GI152973924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAGA TTGCAAACAT TGAGATGAAG AACCCAGTGG TACTAGCACC GATGGCGGGA 
GTATGCAATT CTGCATTCCG TTTAACAGTT AAGGAATTTG GTGCGGGATT GGTATGTGCT
GAAATGGTAA GTGACAAGGC CATTTTATTT AATAATAAAA GAACATTAGA TATGTTATAT
ATTGATGAGA GAGAAAAGCC GCTAAGTCTA CAAATTTTTG GCGGCGAGAA AGAGACGCTT
GTTGAGGCTG CAAAATATGT AGATCAAAAT ACAACGGCGG ATATTATTGA TATTAATATG
GGGTGTCCAG TTCCGAAAAT TACAAAATGT GATGCGGGAG CAAAGTGGCT TTTAGACCCA
AATAAAATAT ATGAAATGGT AGCAGCAGTT GTTGATGCGG TGGAAAAACC AGTTACGGTT
AAAATGCGTA TTGGCTGGGA TGAAGATCAT ATCTTCGCAA TTGAAAATGC TAGAGCGGTT
GAACGTGCGG GAGGTCAAGC TGTAGCAGTT CATGGACGCA CGCGTGTTCA AATGTACGAG
GGTAAAGCAG ATTGGGATAT TATTAAACAA GTGAAACAAG CGGTGAATAT TCCTGTTATC
GGTAATGGTG ATGTGGAAAC TCCGCAAGAT GCTAAGCGTA TGCTAGATGA AATTGGTGTA
GATGGGGTTA TGATTGGGCG TGCAGCGCTT GGAAATCCGT GGATGATTTA TCGTACTGTG
AAGTATTTAG AAACTGGAGA ATTAATGCCA GAACCAACAG CGCGTGAGAA AGTTGATGTA
TGTATGCTAC ATTTAGATCG TCTCATCGAT TTAAAGAATG AGCATATTGC AGTACGCGAA
ATGAGGAAGC ATGCAGCTTG GTATTTAAAA GGTGTTCGCG GAAATGCGAG AGTGCGCAAT
GGGATCAATG CTTGTAATAC TCGTGAAGAT CTTGCTTCAC TATTAGGTGC ATTTGTAGAA
GAGGTAGAAG CGAAACAAGA AAATATTCAT ATCAGTTGA
 
Protein sequence
MLKIANIEMK NPVVLAPMAG VCNSAFRLTV KEFGAGLVCA EMVSDKAILF NNKRTLDMLY 
IDEREKPLSL QIFGGEKETL VEAAKYVDQN TTADIIDINM GCPVPKITKC DAGAKWLLDP
NKIYEMVAAV VDAVEKPVTV KMRIGWDEDH IFAIENARAV ERAGGQAVAV HGRTRVQMYE
GKADWDIIKQ VKQAVNIPVI GNGDVETPQD AKRMLDEIGV DGVMIGRAAL GNPWMIYRTV
KYLETGELMP EPTAREKVDV CMLHLDRLID LKNEHIAVRE MRKHAAWYLK GVRGNARVRN
GINACNTRED LASLLGAFVE EVEAKQENIH IS