| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_0048 |
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| Symbol | |
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| ID | 5344241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | + |
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| Start bp | 54903 |
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| End bp | 58433 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640837590 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001373418 |
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| Protein GI | 152973901 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGAT TATTAGAGCA ATTTTATAAA AATAAAGAGG TTCAATCCAT TATAAATGGT
TTAGAAGAAG GATTAAAAGA GCAACTGGTA TCAGGGATGG CAACTTCCTC CCGTTCTTTA
TTAATGGCTG CTTTATATAA AAAGACAAAG CAGTCTCAAC TTGTTGTGAC ACACAATTTA
TATCAAGCAC AAAAAATCTA TGAAGACTTA GTATCATTAC TTGGTGAAAA GGACGTCTGG
CTGTATCCTG TGAATGAATT AATTGCATCA GAAGTTGGTG TTGCCAGCCC TGAACTGAAA
GCACAGCGAA TTGAAGTGTT AAATCGTTTA GCGGCGGGAG AGAATGGTAT CATTGTTGCC
CCTGTTGCTG GATTACGAAG ATTTTTGCCT ATGAAGGAGT TATGGAAGCA AAAGCAAATT
GAAATCAATC TAGGGCAAGA GGTTGATTTA GATGCATTGC TTCATACTTT ACATCATATT
GGTTATGAGC GTAAATCAAT GGTAGAGGCT CCAGGAGAGT TTAGCTTGCG CGGGGGAATA
TTGGATATTT ATCCTTTAAC AGAGGAATTG CCGTTTCGTA TTGAATTTTT TGATACAGAG
GTTGATTCGA TTCGCTTATT CGATGTTGAA GAACAACGAT CTCAAGATAA AAGAGAAAGT
GTAAAGTTTG GACCAGCGAC GGAGTTTGTA TTTTCACCAG AAGAGTTGCG TGTAGGTATA
GAGCATCTTG AAAAAGGGCT AATGAAGACG ATGCAAAAAT TATCTGATGA CAAGATTAAG
ACAGCAGTAT TAGAAACGGT TAGTCATGAG ATAGAGTTAT TAAAGAATGG TCAAAATATA
GAGCAAATGT TTAAGTATTT ATCTATTTTC TACAAGGAAC CTGCTAGTCT AATAGATTAT
TTACCTGAAA ACGGTGTAGT TATTTTAGAT GAAATTTCAC GCGTTCAAGA GACAGCATCG
CATCTTGAGA CAGAAGAGGC AGAGTGGTAT ACATCACTTC TTAGTGAAGG GGCTATTATT
CAAGACTTGG TATTCTCTCA TTCCTTTGAA GAATTTTTGC GCCATAAAAA AAGAAGTTTT
GTGTATTTAA CATTATTTTT ACGTCACATT GCACATACAC ACCCACAAAA TATTGTCAAT
GTGACATGTA AAACAATGCA GGATTTTCAT GGGCAAATGC AACTCTTGAA AACAGAAATT
GATAGGTGGA ATGAGGGGCA ATTTACAACA GTTATCTTAG GAACAGATGA AGAGCGTGCC
AAGAAATTAC AACATATATT AAGTGATTAT GATATTGAGG CAGATATTAT AGAATCGACA
GATATATTAC TTCCTGGACG TTTGCAAATT GCTGTAGGTG ATTTACATGC AGGATTTGAA
ATGCCGATGC AAAAGCTTGT TGTCATTACA GAAAAAGAAC TGTTCCATAA AAAGGTGAAA
AAGTCGCGAC GCAAGCAAAA GTTATCAAAT GCCGAGCGAA TTAAAAGCTA TTCCGAACTA
AAAGTTGGGG ATTATGTTGT TCATGTAAAC CATGGTATTG GTAAATTTTT AGGAATAGAA
ACACTAGAGA TTAATGGTGT TCATAAAGAT TACTTAAATA TTAAATATCA AGGAAATGAT
AAATTATACG TTCCAATTGA ACAAATTGAT CAAGTTCAAA AATATGTAGG GTCGGAAGGT
AAAGACCCGA AAGTTTACAA ACTTGGTGGT AATGATTGGA AAAAGGTGAA AACAAAGGTA
GAAAAATCTG TACAAGATAT TGCAGATGAT TTGATTAAAT TATATGCAGA ACGTGAGGCG
TCAAAAGGAT ATGCGTTTAC ACCAGATACT GCAGAACAAC GGGAGTTTGA ATCTTCTTTC
CCATATCAAG AGACAGAAGA TCAATTGCGC TCCATTGAAG AGATTAAAAA AGATATGGAA
CGCAGTCGAC CAATGGATCG TCTTCTTTGT GGTGATGTTG GTTATGGAAA GACAGAAGTA
GCGATTAGGG CGGCCTTTAA AGCGATTATG GATGAAAAAC AGGTTGCAAT TTTAGTACCG
ACAACCATTC TTGCGCAACA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGACTATCCG
ATTAACATCG GGTTATTAAG TCGTTTCCGT ACTCGTAAAG AACAAAATGA AACGATTAAA
GGATTGAAAG ATGGGACTGT CGATATTGTT ATTGGGACAC ATCGTATCTT ATCTAAAGAT
GTAACATATA AAGACTTAGG CCTTCTTATT ATTGATGAAG AACAACGATT TGGTGTTACG
CATAAGGAAA AAATTAAGCA ATTGAAGGCA AATATTGATG TTTTAACGTT AACAGCAACT
CCAATTCCAC GTACACTTCA TATGTCTATG CTTGGAGTAC GGGATTTATC GGTTATTGAA
ACACCGCCAG AAAATCGTTT CCCAGTACAA ACGTATGTAG TGGAATATAA CCCTGCACTA
ATTCGGGAAG CGATAGAAAG AGAACTTGCC CGAGGTGGTC AAATTTACTT CTTATATAAT
CGTGTAGAGG ATATTGAAAG AAAAGCAGAT GAAATTTCTA TGTTAGTTCC AGAGGCCCGT
GTAACATATG CACATGGGAA AATGAATGAA AGTGAACTTG AATCTGTCAT GTTGTCATTT
TTAGAGGGAC AATATGATGT TCTAGTAAGT ACAACAATTA TTGAAACGGG CGTTGATATT
CCCAATGTAA ATACATTAAT CGTGTATGAT GCAGATCGTA TGGGATTATC ACAGTTGTAT
CAGCTTCGTG GCCGAGTTGG TCGTTCAAAT CGTGTTGCTT ATGCATATTT TGCATACAAG
CGCGACAAAG TGTTATCTGA AGTTGCTGAG AAGCGCCTGC AAGCAATTAA GGAATTTACG
GAGCTTGGAT CAGGCTTCAA AATTGCAATG CGAGATTTAT CTATTCGTGG TGCAGGGAAT
TTATTAGGAG CGGAACAACA TGGATTTATT GATTCGGTTG GATTTGATCT ATATTCCCAA
ATGTTAAAAG ATGCCATTGA ACAAAGAAAA GGAAAACAGG GCATTGAAAA TACAATTGAT
GTTGAAATTG ATTTAGAAGT AGATGCATAT TTACCGGATA GCTATATATC AGATAGTAAA
CAAAAAATTA TGATGTACAA ACAATTTAGA GGTGTTTCTA CACTTGAAGA TATTGAAGAA
TTACAAGAAG AAATGATTGA TCGATTTGGT GATTATCCGC AAGAGGTAGG ATATTTATTA
CAAATTGCAA ATATTAAAGT GTTGGCAATG AAAGAGCAGA TTGAATTAAT TAAACAAACG
AAGTCTGAGG TGACATTCTT ATTCTCGGAA CAAGCAAGTC AAAATATTGA TGGTGGAAAA
CTATTTATGC TTGGAAATAA ATTTGGACGT ATGATTGGAC TTGGAATGGA AGGACCACAC
TTGAAAGTTA GTATGAAAAT AAATGGATTA GAAACATCAA AATGGTTAAC GATTGCTGAA
AATTTATTAA AAGGCTTACC AGACGTGAAG AAAGAGACAA TAAATGCTTA A
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| Protein sequence | MIGLLEQFYK NKEVQSIING LEEGLKEQLV SGMATSSRSL LMAALYKKTK QSQLVVTHNL
YQAQKIYEDL VSLLGEKDVW LYPVNELIAS EVGVASPELK AQRIEVLNRL AAGENGIIVA
PVAGLRRFLP MKELWKQKQI EINLGQEVDL DALLHTLHHI GYERKSMVEA PGEFSLRGGI
LDIYPLTEEL PFRIEFFDTE VDSIRLFDVE EQRSQDKRES VKFGPATEFV FSPEELRVGI
EHLEKGLMKT MQKLSDDKIK TAVLETVSHE IELLKNGQNI EQMFKYLSIF YKEPASLIDY
LPENGVVILD EISRVQETAS HLETEEAEWY TSLLSEGAII QDLVFSHSFE EFLRHKKRSF
VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMQLLKTEI DRWNEGQFTT VILGTDEERA
KKLQHILSDY DIEADIIEST DILLPGRLQI AVGDLHAGFE MPMQKLVVIT EKELFHKKVK
KSRRKQKLSN AERIKSYSEL KVGDYVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND
KLYVPIEQID QVQKYVGSEG KDPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA
SKGYAFTPDT AEQREFESSF PYQETEDQLR SIEEIKKDME RSRPMDRLLC GDVGYGKTEV
AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKEQNETIK
GLKDGTVDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NIDVLTLTAT
PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL IREAIERELA RGGQIYFLYN
RVEDIERKAD EISMLVPEAR VTYAHGKMNE SELESVMLSF LEGQYDVLVS TTIIETGVDI
PNVNTLIVYD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE KRLQAIKEFT
ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRK GKQGIENTID
VEIDLEVDAY LPDSYISDSK QKIMMYKQFR GVSTLEDIEE LQEEMIDRFG DYPQEVGYLL
QIANIKVLAM KEQIELIKQT KSEVTFLFSE QASQNIDGGK LFMLGNKFGR MIGLGMEGPH
LKVSMKINGL ETSKWLTIAE NLLKGLPDVK KETINA
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