Gene Bcer98_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0040 
Symbolipk 
ID5344222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp48433 
End bp49302 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content42% 
IMG OID640837582 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_001373410 
Protein GI152973893 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCTAC TAGTGAAAGC ACCAGCAAAG ATTAATTTGT CGTTAGATGT ACTGGGAAAA 
AGACAAGACG GCTATCATGA AGTAAAAATG ATTATGACAA CAATCGATTT AGCCGATCGT
TTAGAGCTAA CAGAGTTAAC GGAAGATCGT ATTGAAATCG TGTCTCATAA TCGATATGTC
CCAGACGACC AACGTAACTT GGCTTATCAG GCAGCAAAAT TATTAAAAGA AAAATATCAG
GTAAAACAAG GTGTATCTAT TGCGATTGAA AAAACAATTC CGGTGGCAGC AGGGTTAGCA
GGTGGAAGCA GCGATGCAGC TGCTACATTA CGTGGCCTTA ATAAAATATG GAATTTAGGA
CTTACAATGG ATGAACTAGC GGAACTTGGC GCAGAGATTG GATCCGATGT ATCTTTTTGT
GTGTATGGAG GAACGGCAAT TGCAACAGGA AGAGGAGAGA AGATTGAACA TATAAAAACA
CCTCCATCTT GCTGGGTTAT TTTAGCGAAG CCGCATATCG GTGTGTCGAC TGCTGACGTA
TATGGAAATT TAAAGTTGAA TCGTGTTACA CACCCTGACG TCGATCAAAT GGCCGAAGCG
ATTAATCGTG GTGATTATCA GGGGATTTGT AATGCTGTTG GCAACGTATT GGAGGATGTG
ACATTTGCGA TGCATCCTGA AGTTGCACGT ATTAAAACAC GGATGAAGCG ATTTGGGGCA
GATGCGGTTT TAATGAGCGG CAGTGGTCCA ACGGTGTTTG GACTTGTGCA TCATGATTCG
AGAATGCATC GTATCTATAA TGGATTAAAA GGGTTTTGTG AACAGGTATA TGCTGTACGC
CTATTAGGAG AGCGAGAAAC GCTTGAATAA
 
Protein sequence
MKLLVKAPAK INLSLDVLGK RQDGYHEVKM IMTTIDLADR LELTELTEDR IEIVSHNRYV 
PDDQRNLAYQ AAKLLKEKYQ VKQGVSIAIE KTIPVAAGLA GGSSDAAATL RGLNKIWNLG
LTMDELAELG AEIGSDVSFC VYGGTAIATG RGEKIEHIKT PPSCWVILAK PHIGVSTADV
YGNLKLNRVT HPDVDQMAEA INRGDYQGIC NAVGNVLEDV TFAMHPEVAR IKTRMKRFGA
DAVLMSGSGP TVFGLVHHDS RMHRIYNGLK GFCEQVYAVR LLGERETLE