Gene Bcer98_0005 details

Gene Information

• Locus tag: Bcer98_0005
• Symbol: gyrB
• ID: 5344960
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: +
• Start bp: 4698
• End bp: 6620
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640837536
• Product: DNA gyrase subunit B
• Protein accession: YP_001373376
• Protein GI: 152973859
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAA AGGAAATGCA AGCAAACTCA TATGATGAAA GTCAAATACA GGTACTTGAA 
GGGTTAGAAG CAGTTCGAAA ACGCCCAGGT ATGTACATTG GATCGACAAG TGGAAAAGGT 
CTTCATCACC TTGTATGGGA GATTGTAGAT AATAGTATTG ATGAAGCGTT AGCGGGATAT 
TGTGATGAGA TTAATGTGGT CATCGAAGAA GACGATAGTA TCCGTGTAAC GGATAACGGC 
CGTGGTATTC CAGTTGGTAT ACAAGAAAAA ATGGGACGTC CTGCAGTAGA AGTCATTATG 
ACAGTACTTC ATGCTGGTGG TAAATTTGGC GGTGGTGGTT ATAAAGTTTC CGGTGGTCTT 
CATGGTGTAG GGGCATCTGT AGTAAACGCC CTATCAACCG AGTTAGAAGT ATTTGTACAC 
CGCGAAGGAA AAATCCACTA CCAAAAATAT GAACGAGGCA TTCCAGTTGC AGATTTAAAA 
GTAATTGGTG AAACAGATCG CACAGGAACA GTAACTCGCT TTAAGCCAGA CCCAGAAATT 
TTTAAAGAAA CAACCGTGTA TGATTTTGAT ATATTAGCAA CTCGTATGCG TGAACTAGCA 
TTTTTAAATC GTAATATTAA ATTAACAATT GAAGATAAAC GTGAAAATAA ACAGAAGAAA 
GAATTCCATT ACGAAGGTGG AATTAAATCT TATGTTGAAC ATTTAAATCG TTCGAAGCAG 
CCAATTCATG AAGAACCAGT ATATGTAGAA GGCGCAAAAG ATGGGATTCA GGTTGAAGTT 
TCTCTCCAAT ATAACGAAGG ATATACAAAT AATATTTATT CATTTACAAA TAACATCCAT 
ACGTATGAAG GTGGTACGCA TGAGGTTGGA TTTAAAACAG CTTTAACGCG TGTGATTAAT 
GACTATGGAA GAAAAAATAA TATTTTAAAA GATGCTGATA GTAATTTAAC TGGTGAAGAT 
GTTCGGGAAG GTTTAACTGC AATTGTATCC ATTAAACATC CGAATCCGCA ATTTGAAGGG 
CAGACAAAGA CGAAACTTGG TAATAGCGAA GCGAGAACGA TTACAGAGTC TGTATTTTCA 
GAGGCGTTTG AAAAGTTTCT TCTAGAAAAT CCAAATGTTG CACGTAAAAT TGTGGAAAAA 
GGGACAATGG CAGCAAGAGC ACGTGTAGCT GCGAAGAAAG CGCGTGAATT AACTCGTAGA 
AAGAGTGCGT TAGAGGTTTC AAGTTTACCT GGTAAGTTGG CGGATTGTTC TTCTAAAGAC 
CCATCCATCA GTGAAATTTA TATCGTAGAG GGTGACTCTG CGGGTGGATC TGCAAAGCAG 
GGGCGCGATC GTCACTTCCA AGCAATCTTA CCGCTTAAGG GGAAAATCAT TAACGTTGAG 
AAAGCTCGAT TAGATAAAAT TTTATCCAAT GATGAAGTGC GTACAATTAT TACAGCAATT 
GGGACAAACA TCGGTGGCGA TTTTGATATA TCAAAGGCCC GCTATCATAA AGTTATTATT 
ATGACCGATG CCGATGTCGA TGGTGCACAT ATTCGTACCC TATTATTAAC GTTCTTCTAT 
CGTTATATGC GTCAAATTAT TGAACATGGT TATGTATATA TTGCACAACC ACCATTGTTT 
AAAGTGCAAC AAGGGAAAAA GATTCAGTAT GCTTATAACG AAAAAGAACT TGAAAGAATA 
TTGGCCGAGT TGCCAGCGCA ACCTAAGCCA AGTATTCAGC GTTACAAAGG TCTTGGTGAG 
ATGAATCCGG CTCAATTATG GGAAACGACA ATGGATCCAG AGGTGCGTTC ATTATTGCAA 
GTTTCTTTAC AAGATGCAAT CGAAGCGGAT GAAACTTTTG AAATTTTAAT GGGAGATAAA 
GTTGAACCGC GTCGTAATTT CATTCAAGAG AATGCAAAAT ATGTAAAAAA CCTTGATATT 
TAA 

 

Protein sequence

MEQKEMQANS YDESQIQVLE GLEAVRKRPG MYIGSTSGKG LHHLVWEIVD NSIDEALAGY 
CDEINVVIEE DDSIRVTDNG RGIPVGIQEK MGRPAVEVIM TVLHAGGKFG GGGYKVSGGL 
HGVGASVVNA LSTELEVFVH REGKIHYQKY ERGIPVADLK VIGETDRTGT VTRFKPDPEI 
FKETTVYDFD ILATRMRELA FLNRNIKLTI EDKRENKQKK EFHYEGGIKS YVEHLNRSKQ 
PIHEEPVYVE GAKDGIQVEV SLQYNEGYTN NIYSFTNNIH TYEGGTHEVG FKTALTRVIN 
DYGRKNNILK DADSNLTGED VREGLTAIVS IKHPNPQFEG QTKTKLGNSE ARTITESVFS 
EAFEKFLLEN PNVARKIVEK GTMAARARVA AKKARELTRR KSALEVSSLP GKLADCSSKD 
PSISEIYIVE GDSAGGSAKQ GRDRHFQAIL PLKGKIINVE KARLDKILSN DEVRTIITAI 
GTNIGGDFDI SKARYHKVII MTDADVDGAH IRTLLLTFFY RYMRQIIEHG YVYIAQPPLF 
KVQQGKKIQY AYNEKELERI LAELPAQPKP SIQRYKGLGE MNPAQLWETT MDPEVRSLLQ 
VSLQDAIEAD ETFEILMGDK VEPRRNFIQE NAKYVKNLDI