Gene Bcer98_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0004 
SymbolrecF 
ID5344958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3538 
End bp4659 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content33% 
IMG OID640837535 
Productrecombination protein F 
Protein accessionYP_001373375 
Protein GI152973858 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.177605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTATTT CAGAAATACA ATTAAAAAAT TATCGAAATT ATGAAGATTT AAACCTTTCT 
TTTGAGGATA AAGTCAATGT AATCATTGGT GAAAATGCAC AAGGGAAAAC AAATTTGATG
GAAGCGATCT ATGTGTTAGC AATGGCGAAA TCTCATAGAA CTTCAAATGA TCGTGAACTC
ATCCGATGGG ATGAGGATTA TGGTAAAATA AAAGGTAGAT TACAAAAACG AAATAGTTCC
GTATCTTTGG AATTAAATAT TTCTAAAAAA GGAAAAAAGG CAAAATTGAA TGAACTTGAA
CAACAAAAGT TGAGCCAATA TATTGGTGAG ATGAACGTTG TTATGTTTGC CCCTGAAGAT
TTAAATCTTG TAAAAGGAAG TCCTCAAGTC AGAAGACGCT TTTTAGATAT GGAATTAGGA
CAAATAGCTC CTGTTTATTT GTATGAATTA AGTCAATATC AAAAAGTGCT CACACAACGA
AACCATTTGC TTAAGGCAAT GCAAGGTAAA AATGAGGAAA CGATGTTGGA TGTATTTACG
CTTCAACTTA TTGAACATGG TACGAAAATT CTACAAAAAC GTTTTGAATT CTTACATTTA
CTACAAGAGT GGGCTGCTCC AATCCATCGT GGGATTAGCA GAGGGCTTGA GGAATTGGAA
ATCGTTTATA AGCCAAGTGT AGATGTATCA GAATCAATGG ATTTGTCGAA AATAAAAGAA
GTATACTATG AAAGTTTTCA ATCTGTGAAA CAACGTGAAA TTTTCCGTGG TACGACTTTA
ATTGGTCCTC ATCGTGATGA TTTACAATTC TTCGTTAATA GTAAAAATGT TCAAGTCTTT
GGCTCACAAG GCCAGCAACG AACAACTGCA CTATCCCTAA AATTAGCTGA AATTGAATTG
ATTTATGCAG AGGTAAAAGA GTACCCAATT CTTTTATTAG ATGATGTATT ATCAGAATTA
GATGATTACC GTCAATCACA TCTTTTAAAT ACAATTCAAG GAAAAGTGCA AACATTTGTG
ACAACGACGA GTGTCGACGG AATTGAACAC GAAACATTAA AAAAAGCGAA AACAATTCAT
GTAAAAAGCG GCACGGTAGA TTGTGAAATA GACAGAATAT AA
 
Protein sequence
MFISEIQLKN YRNYEDLNLS FEDKVNVIIG ENAQGKTNLM EAIYVLAMAK SHRTSNDREL 
IRWDEDYGKI KGRLQKRNSS VSLELNISKK GKKAKLNELE QQKLSQYIGE MNVVMFAPED
LNLVKGSPQV RRRFLDMELG QIAPVYLYEL SQYQKVLTQR NHLLKAMQGK NEETMLDVFT
LQLIEHGTKI LQKRFEFLHL LQEWAAPIHR GISRGLEELE IVYKPSVDVS ESMDLSKIKE
VYYESFQSVK QREIFRGTTL IGPHRDDLQF FVNSKNVQVF GSQGQQRTTA LSLKLAEIEL
IYAEVKEYPI LLLDDVLSEL DDYRQSHLLN TIQGKVQTFV TTTSVDGIEH ETLKKAKTIH
VKSGTVDCEI DRI