Gene Bcer98_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0002 
Symbol 
ID5344952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2043 
End bp3188 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content32% 
IMG OID640837533 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001373373 
Protein GI152973856 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000678483 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTT CAATTCAAAA AGACTATCTT GTAAGAAGTG TACAAGATGT AATGAAAGCT 
GTTTCCTCTC GCACCACAAT TCCGATCCTT ACTGGAATTA AAGTTGTAGC TACAGAAGAA
GGAGTTACAT TAACAGGAAG TGATTCAGAT ATTTCAATCG AATCATTTAT TCCTGTTGAA
GAAGATGGAA AAGAAATCGT AGAAGTTAGT CAATCAGGTA GTATTGTTTT ACAAGCAAAA
TATTTTAGTG AAATCGTAAA AAAATTACCA AAAGACATTG TCGAAATTTC CGTCGAAAAT
CATTTTATGA CAAAAATAAA ATCTGGAAAA TCAGAGTTTA ATTTAAATGG ATTAGATTCT
GCGGAATATC CATTATTACC ACAAATCGAA GAACATCATG TATTTAAAAT ACCAACAGAT
TTACTAAAAC ATATGATTCG TCAAACTGTA TTTGCAGTAT CAAGTTCTGA AACTCGCCCA
ATCTTGACAG GTGTAAACTG GAAGGTATAT AACAGTGAGT TAACTTGTAT TGCAACAGAT
AGTCACAGAT TGGCACTTCG CACAGCGAAA ATTGAAGGAC ATAACATTTC TGATGAATTT
CAAGCAAATG TTGTCATTCC AGGTAAAAGT TTAAATGAGT TAAGTAAAAT TTTAGATGAG
TCTGAAGAAA TGGTGGATAT TGTTATTACA GAGTATCAAG TATTATTCCG AACAAAACAT
TTATTATTCT TCTCTCGATT ATTGGAAGGG AATTACCCTG ATACAACTCG CTTAATTCCT
GCTGAAAGTA AGACGGATAT CTTTGTCAAT ACGAAAGAGT TTTTGCAAGC TATTGATCGC
GCTTCCTTGT TGGCAAGAGA TGGGCGTAAC AACGTTGTAA AACTATCAAC ATTTGAACAG
AAAATGCTAG AAATTTCTTC GAATTCACCG GAAATTGGGA AAGTAGTAGA AGAAGTTCAA
TGTGAAAAAA TAGATGGTGA AGAATTAAAA ATATCATTTA GTGCAAAATA TATGATGGAT
GCATTAAAAG CTTTAGATAG TACTGAAATT AAAATTAGCT TTACTGGTGC GATGAGACCT
TTCTTAATTC GTACAGTAAA TGATAACTCC ATTATTCAAC TAATTTTACC GGTTCGTACT
TACTAA
 
Protein sequence
MRFSIQKDYL VRSVQDVMKA VSSRTTIPIL TGIKVVATEE GVTLTGSDSD ISIESFIPVE 
EDGKEIVEVS QSGSIVLQAK YFSEIVKKLP KDIVEISVEN HFMTKIKSGK SEFNLNGLDS
AEYPLLPQIE EHHVFKIPTD LLKHMIRQTV FAVSSSETRP ILTGVNWKVY NSELTCIATD
SHRLALRTAK IEGHNISDEF QANVVIPGKS LNELSKILDE SEEMVDIVIT EYQVLFRTKH
LLFFSRLLEG NYPDTTRLIP AESKTDIFVN TKEFLQAIDR ASLLARDGRN NVVKLSTFEQ
KMLEISSNSP EIGKVVEEVQ CEKIDGEELK ISFSAKYMMD ALKALDSTEI KISFTGAMRP
FLIRTVNDNS IIQLILPVRT Y