Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4643 |
Symbol | |
ID | 5383232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009671 |
Strand | + |
Start bp | 5168 |
End bp | 5995 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640837403 |
Product | integrase catalytic region |
Protein accession | YP_001373243 |
Protein GI | 153012032 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.623025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCG TCGCAGATAC GCTGGGCGTA TCCCGTTCCA ACCTCATCGA GCGGCTGAAA GGCAGATCGA AGCCGCGCGG CTCCTATCAC AAGGCCGAGG ATGCAGAGCT TTTGCCCATC ATTCGCAGGC TGGTAGATCA AAGGCCAACC TATGGCTATC GGCGTATCGC CGCGCTCCTC AATCGCGAGA GGCGAGCCGC CGATAAGCCT GTCGTCAACG CCAAACGGGT CCATCGCATC ATGGGCAACC ACGCCATGCT GCTGGAGAAG CATACCGCCG TTCGCAAGGG CCGCATCCAT GACGGCAAGG TCATGGTTAT GCGATCCAAC CTGCGCTGGT GCTCGGACGG TCTGGAGTTC ACCTGCTGGA ATGGCGAGGT CATTCGTCTC GCTTTCATCA TCGATGCCTT CGACCGGGAG ATCATTGCCT GGACGGCAGT TGCCAATGCG GGCATCTCCG GCTCGGACGT GCGCGATATG ATGCTGGAGG CGGTCGAGAA ACGCTTCCAG GCAACACGAG CCCCGCATGC TATCGAGCAT CTCTCTGACA ACGGCTCGGC TTATACCGCG CGGGACACGA GGCTGTTTGC TCAAGCCCTC AATCTGACGC CCTGCTTCAC GCCGGTGGCC AGCCCGCAGT CGAACGGAAT GTCCGAGGCA TTCGTTAAAA CCCTGAAGCG GGATTACATC CGCATCGCAG CACTACCGGA CGCACAAACA GCGCTCCCGC TCATCGACGG ATGGATCGAG GACTATAATG AAATCCATCT ACATTCCGCG CTCAAGATGG CTTCCCCTCG GCAGTTCATC AGGGCTAAAT CAAACTAG
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Protein sequence | MKAVADTLGV SRSNLIERLK GRSKPRGSYH KAEDAELLPI IRRLVDQRPT YGYRRIAALL NRERRAADKP VVNAKRVHRI MGNHAMLLEK HTAVRKGRIH DGKVMVMRSN LRWCSDGLEF TCWNGEVIRL AFIIDAFDRE IIAWTAVANA GISGSDVRDM MLEAVEKRFQ ATRAPHAIEH LSDNGSAYTA RDTRLFAQAL NLTPCFTPVA SPQSNGMSEA FVKTLKRDYI RIAALPDAQT ALPLIDGWIE DYNEIHLHSA LKMASPRQFI RAKSN
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