Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4558 |
Symbol | |
ID | 5383041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009669 |
Strand | - |
Start bp | 94371 |
End bp | 95066 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640837234 |
Product | VirB8 family protein |
Protein accession | YP_001373074 |
Protein GI | 153011861 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.837968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT CCAAAGAAGC TGCATTGAGA ACTTATTTTC AGGACGGTGA TCGTTGGGAG AACGAAATCG TCCGGAAAGC AAAACGTTCA AAAGCCGTGG CATGGTTCGT AACCATCATA TTCGGGCTCG TCGCTCTTTT CGCATTGCTC GCGCTCGTTA TGCTGGTTCC GCTAAAATCT TTCGAGCCTG TGATTGTCGT CGTAGACAAG GCTACCGGCT ACATCGAAAC CAAAAGCGGA CTGACAAAAG CGCAAAATCT GACCGATTCA CGCGCAATCA CGCAAGCCAA CGTCGTTCGG TATATCAGGA CGCGCGAAGG CTATGATCCT TACGCGATCG ATACAAATTT TGGCACGGCG GCACTATTGT CGACAGGAGA TGCCGCTCGC GAATTGCAAG AGCAATATAG CGCCGCGAAT CCGAACAATC CGGCGAAGGT CTACGGGAAA AACAAGCGTG TGCTTGTCGA TGTGAAGTCT GTCACCTTCC CCAACGATTC AACCGCTCTT GTTCGTTTCT CAACCACTGA AAAGTCCGAT ACCGATGCCA TTACCAGACA CTACATAGCT GTCGTGCGCT ATCGCTACAC GGACGAACCC GCCACAAACG AATGGCGGTT TGAAAATCCC CTCGGCTTCC AGGTTTATAA TTACAGGCGT GATCAGGAAA CCGTCACGGA AGGGAGCAAG GGATGA
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Protein sequence | MTDSKEAALR TYFQDGDRWE NEIVRKAKRS KAVAWFVTII FGLVALFALL ALVMLVPLKS FEPVIVVVDK ATGYIETKSG LTKAQNLTDS RAITQANVVR YIRTREGYDP YAIDTNFGTA ALLSTGDAAR ELQEQYSAAN PNNPAKVYGK NKRVLVDVKS VTFPNDSTAL VRFSTTEKSD TDAITRHYIA VVRYRYTDEP ATNEWRFENP LGFQVYNYRR DQETVTEGSK G
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