Gene Oant_4488 details

Gene Information

• Locus tag: Oant_4488
• ID: 5383051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009669
• Strand: -
• Start bp: 27488
• End bp: 29362
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640837173
• Product: ABC transporter related
• Protein accession: YP_001373013
• Protein GI: 153011800
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCGCA TAAGGCGCGG GACCGTCGTC GGGATCGTCG CGACGGTGCT CCCCCTGGTG 
GTCGCGGCCC TCGTGGCGAA GGGCTTTTTT CCCGGCGCGG GCGAACGCTT GGTCACGCTG 
TTCCTGATCA ACGCCGTCGC CGTCATCGGC ATCGGCATCT ACAGCGGCAA TTCCGGCATC 
ATCTCCTTCG GCAATGTGGG CTTCATGGCC ATCGGCGCCT ACGCCTCCGG TCTCCTGACC 
ATCAATCCGA TCGTGCAGAA AACGGCGCTT CCCCATCTGC CGGAATGGCT CATGGGATGG 
GGCATGCCCT TCCTGCCGGC GCTTCTCGTT GCGCTTCTCG TCGTCGCGCT GGCCGCGATC 
GCCATCGGCA TTCCGGTCGC CCGGCTCGGC GGTTCCTCGG CCTCGATCTG CACGCTGGGC 
TTTCTCGTCA TCGTGCATGT CGTGCTCGTC GCTTCCAGCG ATTTCACCCG CGGCAGCCAG 
ACCTTCTTCG GCATTCCGCG CGCGGTGAAC CTCTGGGTGG CGCTGCCCTT TGCGGTACTC 
GCCGTCGCCA TTGCCCGCAT CTATCGCGAC AGTGCGGCGG GCATGAAGCT GCGCGCCTCG 
CGGGAGGACG ATATCGCCTC GACGGCGGTC GGCGTGAATG TGCGTCTGCA CCGTTTTCTC 
GCCTGGGTGC TCGGGGCAAT GCTTTCCGGC GCGGCCGGCG TGCTGTTCGC CCATTTCATC 
GGCGCTTTCT CGCCGAAGGA TTTCTATTTC AACCTCACCT TCATGCTTCT CGCCATGCTG 
ATCCTGGGTG GCATCAGCAC CGTCTCCGGC GCGGTGGTCG GCACCGCGGT CATCATGGTC 
ATCGTGGAGC TCCTGAGAAA GCTGGAGGGT GGCGTCGATC TCGGCGTCTT CCAGCTTCCG 
ACGGTCTTCG GCCTGACCGA TATCGGCATC GGCCTTGCGA TCCTGCTCGT CATGTACCGC 
CTTCAGGACG GGCTGCTCGG GGTGCGCGAA CTCGACGAGC AGGTGCCGTT CCTCAAGCGT 
CTCTCTGCCG GCGCGGCGAA GCCTGCAACG GATGAGCCCG CGCAGGTCGC GGCGAGCCAT 
GCGGGGACAT TGCGGGTCGA AAATGTCGGC AAGCGTTTCT CCGGGCTGGT CGCGCTGGAA 
AAGGCCGATT TCGAAATCCG TCCCGGCCTC GTCACCGGCC TGATCGGCCC GAATGGCGCG 
GGCAAGTCGA CACTCATCAA CAGCGTCTCG GGCGTCGTGC CGCCTTCGAC CGGCCGCGTG 
ATGATCGATG GCACGCACGT GGCGTCCCTG CCGGTGCACC GCGTGCCGGT CTCGGGCCTT 
GCCCGCACCT TCCAGAACAT CCGCCTCTTC AAGAACCTCA CCGTCCTGGA AAACGTCACG 
GTTGCCGCAA GCGCCGTCGC CAAGGACCGC GATCCGGTGG ATCTTGCCCG CGAGGCGCTG 
GCGGAAGTCG GCCTCGGCGA GGTTGCCGGT CAACTCGCCG GCACGCTCTC CTACGGCGCG 
CAGCGGCGAC TGGAAATCGC CCGCGCGCTG GCGCTGAAAC CCCGCTACCT GCTGCTCGAC 
GAGCCCGCCG CCGGCATGAA CCCGGCCGAA ACACAGGAAT TGATGACGGT GCTCGATCGC 
ATCCGCACCA AACATCGCCT CGGCCTGCTG GTGGTGGAGC ACGACCTGAA GCTGATCATG 
CGCCTCTGCG ATATCGTCGT GGTGCTCAAC AAGGGCCAGC AGATCGCCAT CGGCACGCCG 
GCGGAGATCC AGGCCAACCC CGCCGTCATC GAAGCCTATA TCGGCCGGCG CCGCTCGACC 
GCCCAGGAGA CCAAGCCGGC AACCGGCGCT GCCCTGCCGG GTATCGATCC CCATGCCGCC 
GGCAACCCCG CATAA 

 

Protein sequence

MVRIRRGTVV GIVATVLPLV VAALVAKGFF PGAGERLVTL FLINAVAVIG IGIYSGNSGI 
ISFGNVGFMA IGAYASGLLT INPIVQKTAL PHLPEWLMGW GMPFLPALLV ALLVVALAAI 
AIGIPVARLG GSSASICTLG FLVIVHVVLV ASSDFTRGSQ TFFGIPRAVN LWVALPFAVL 
AVAIARIYRD SAAGMKLRAS REDDIASTAV GVNVRLHRFL AWVLGAMLSG AAGVLFAHFI 
GAFSPKDFYF NLTFMLLAML ILGGISTVSG AVVGTAVIMV IVELLRKLEG GVDLGVFQLP 
TVFGLTDIGI GLAILLVMYR LQDGLLGVRE LDEQVPFLKR LSAGAAKPAT DEPAQVAASH 
AGTLRVENVG KRFSGLVALE KADFEIRPGL VTGLIGPNGA GKSTLINSVS GVVPPSTGRV 
MIDGTHVASL PVHRVPVSGL ARTFQNIRLF KNLTVLENVT VAASAVAKDR DPVDLAREAL 
AEVGLGEVAG QLAGTLSYGA QRRLEIARAL ALKPRYLLLD EPAAGMNPAE TQELMTVLDR 
IRTKHRLGLL VVEHDLKLIM RLCDIVVVLN KGQQIAIGTP AEIQANPAVI EAYIGRRRST 
AQETKPATGA ALPGIDPHAA GNPA