Gene Oant_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4438 
Symbol 
ID5381679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1872504 
End bp1873394 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID640837127 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001372967 
Protein GI153011753 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTCG TCACCTCACA GGATACATCC GCCGCGCCCA AAGGGCAGCG CGATCTGACG 
CCGCTCTTTC TGGTCGGGCC GTCGACGCTT CTGTTCTTCG CGCTGGTGCT GTTGCCGCTC
GGTCTCACCG TGCTGCTTTC ATTCAACAGC TACAGCTATG ACAAAGGCAT CGAGAACGTC
TACACGCTTG CCAATTATAC GCAGGTTCTC AAAGACCCCT ATTACCTCTC GATCTTCTGG
CGCACGCTCA AGCTGGCGCT GATCACAACC GTCATCACGG TGCTGATCGG TGTGCCCGAG
GCCTATATTC TTTCCAATAT GCGCAAGCCA TGGCGCTCGA TCTTCCTTTT GGTCATCATC
GGCCCGCTTC TGGTTTCGGT CGTGGTCCGC ACATTTGGCT GGAGCATGTT GCTGGGGCGC
AATGGCCTCG TGAACAGCGC GCTCGACATG GTGGGCCTGC CGACGACGCA AATCCTCTAC
AGCGAGACAG CCATCGTCAT CGGTCTGGTG CATATCATGC TGCCATTCAT GGTGATCCCG
GTCTGGACCG TGCTGCAAAA GCTCGATCCG TCGGTGGAAG CCGCAGCGCT GACGCTCGGC
GCATCGCGCC TGACAGCACT TCGCCGTGTG GTGTTTCCGC AGGCAGTGCT TGGCATCCTG
TCGGGCAGCC TCATCGTGTT TGCGCTTTCG GCCAGCTCCT TTGCCATTCC GGGCCTGCTC
GGCGGGCGTC GTCTCAAGAT GGCGGCAACG GTTGTCTATG ACGAGTTCCT GATCGAGCTG
AACTGGCCGC TGGGTGCTGC CATCGCCATC ATCGTTCTGG TCGCCAATCT CGTGATCATG
ATTGCCTATA ATCGCATGCT CGAAGGGCAA GCGAGAAAGA AGCTGGGGTA A
 
Protein sequence
MSVVTSQDTS AAPKGQRDLT PLFLVGPSTL LFFALVLLPL GLTVLLSFNS YSYDKGIENV 
YTLANYTQVL KDPYYLSIFW RTLKLALITT VITVLIGVPE AYILSNMRKP WRSIFLLVII
GPLLVSVVVR TFGWSMLLGR NGLVNSALDM VGLPTTQILY SETAIVIGLV HIMLPFMVIP
VWTVLQKLDP SVEAAALTLG ASRLTALRRV VFPQAVLGIL SGSLIVFALS ASSFAIPGLL
GGRRLKMAAT VVYDEFLIEL NWPLGAAIAI IVLVANLVIM IAYNRMLEGQ ARKKLG