Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4409 |
Symbol | |
ID | 5381442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 1842678 |
End bp | 1843838 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640837098 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001372938 |
Protein GI | 153011724 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACATCCC CGAGCGACAA GGCCTCGCGT GATCTGAAGC CCGATTTTGT GGAGCGCCGC CAGTCAGTGC GCGTTCCACT CGCGCCCCTT GGAGAAGATG CCCGAAGCAC CAATATTCTG ACCCCGCTGG TCTTTACGAC CGAAGAGCTG GAACCCCGCG CACAGTTTCC CACATGGCAA CAGCACGTGG CTCCCCTCTA TGATGTGCGG ATGCCGGATG GTGTGAACGC CGAAGACGGT TTTGCCGTTA CCCAGAAAGT CTGGGATCTG CGCGGCATGC TGCTGATAGA ACAGACTGTT CCTCCATTCA GCTATGAACG TACAGCGGAA AAGGTTCGTT TCAGCCCGAT TGATCACTGG CAGATCAGTT TTCTGCGAAG CGGTCGCACA TGGACGGCGG TGGATGATCG TGTGGCGGAA AACGAGCCCG GCATGATCAA TATCCGTTCG TTTGGCTATC CGTTTCGCGG TCGTGCGCTG GCAACGGACG TGGTGCTGCT GATCATTCCG GTCGATCATT TCGCCGGTCT GGGCGGTATG CCGGAAGCGT GCAACAATGC GACGCTCGGA GGCTATCGCG CCAAGCTGCT GATCGACTTC GTATCGACGA TCCAGGCGGG GCTTGACCAT ATCAGAAGCG AAGACCTGCC GGAGCTGCGC GACGCCCTGC GCCAGATCGT ATTTGACACG ATCGCCCCTT TGGTAAAGGA AAACGATGCG AGCGAACACA ATGCGTCTCT CGGGGCTTCT CTGGGGTTGA TGACCAAGGC CAGACGCTTC ATCCAGAAAA ATCTCACGTC CCGTGAACTC ACGCCCGATG CACTGAGCAA GGAGCTCGCC ATCTCACGCA CACATCTCTA TCAGCTGTTC GAAGGCTCGG GCGGGGTACT CAACTATATT CGCCAGAAGC GTTTGCTTGC AGCACATGAG ATGCTTGCGG ATGCATCCGA AAACCGCAGG GTGTCCGACA TCGCGCAGCT GTTTGGCTTC GATACGGCAG CCAATTTCAC GCGGGCATTC ACGCAGCATT TTGGCTACAG TCCGAGCAAT GTCCGCAAGT CGTTGTCGCG AAACGACGGC GTCAGCGACA GCCAGTCTGA CGCGAACCGC TCCCTCACTT TCTCAACCCT GCTACGAACG CTGGCAACGA CCGGTGCGTA A
|
Protein sequence | MTSPSDKASR DLKPDFVERR QSVRVPLAPL GEDARSTNIL TPLVFTTEEL EPRAQFPTWQ QHVAPLYDVR MPDGVNAEDG FAVTQKVWDL RGMLLIEQTV PPFSYERTAE KVRFSPIDHW QISFLRSGRT WTAVDDRVAE NEPGMINIRS FGYPFRGRAL ATDVVLLIIP VDHFAGLGGM PEACNNATLG GYRAKLLIDF VSTIQAGLDH IRSEDLPELR DALRQIVFDT IAPLVKENDA SEHNASLGAS LGLMTKARRF IQKNLTSREL TPDALSKELA ISRTHLYQLF EGSGGVLNYI RQKRLLAAHE MLADASENRR VSDIAQLFGF DTAANFTRAF TQHFGYSPSN VRKSLSRNDG VSDSQSDANR SLTFSTLLRT LATTGA
|
| |