Gene Oant_4409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4409 
Symbol 
ID5381442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1842678 
End bp1843838 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID640837098 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001372938 
Protein GI153011724 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACATCCC CGAGCGACAA GGCCTCGCGT GATCTGAAGC CCGATTTTGT GGAGCGCCGC 
CAGTCAGTGC GCGTTCCACT CGCGCCCCTT GGAGAAGATG CCCGAAGCAC CAATATTCTG
ACCCCGCTGG TCTTTACGAC CGAAGAGCTG GAACCCCGCG CACAGTTTCC CACATGGCAA
CAGCACGTGG CTCCCCTCTA TGATGTGCGG ATGCCGGATG GTGTGAACGC CGAAGACGGT
TTTGCCGTTA CCCAGAAAGT CTGGGATCTG CGCGGCATGC TGCTGATAGA ACAGACTGTT
CCTCCATTCA GCTATGAACG TACAGCGGAA AAGGTTCGTT TCAGCCCGAT TGATCACTGG
CAGATCAGTT TTCTGCGAAG CGGTCGCACA TGGACGGCGG TGGATGATCG TGTGGCGGAA
AACGAGCCCG GCATGATCAA TATCCGTTCG TTTGGCTATC CGTTTCGCGG TCGTGCGCTG
GCAACGGACG TGGTGCTGCT GATCATTCCG GTCGATCATT TCGCCGGTCT GGGCGGTATG
CCGGAAGCGT GCAACAATGC GACGCTCGGA GGCTATCGCG CCAAGCTGCT GATCGACTTC
GTATCGACGA TCCAGGCGGG GCTTGACCAT ATCAGAAGCG AAGACCTGCC GGAGCTGCGC
GACGCCCTGC GCCAGATCGT ATTTGACACG ATCGCCCCTT TGGTAAAGGA AAACGATGCG
AGCGAACACA ATGCGTCTCT CGGGGCTTCT CTGGGGTTGA TGACCAAGGC CAGACGCTTC
ATCCAGAAAA ATCTCACGTC CCGTGAACTC ACGCCCGATG CACTGAGCAA GGAGCTCGCC
ATCTCACGCA CACATCTCTA TCAGCTGTTC GAAGGCTCGG GCGGGGTACT CAACTATATT
CGCCAGAAGC GTTTGCTTGC AGCACATGAG ATGCTTGCGG ATGCATCCGA AAACCGCAGG
GTGTCCGACA TCGCGCAGCT GTTTGGCTTC GATACGGCAG CCAATTTCAC GCGGGCATTC
ACGCAGCATT TTGGCTACAG TCCGAGCAAT GTCCGCAAGT CGTTGTCGCG AAACGACGGC
GTCAGCGACA GCCAGTCTGA CGCGAACCGC TCCCTCACTT TCTCAACCCT GCTACGAACG
CTGGCAACGA CCGGTGCGTA A
 
Protein sequence
MTSPSDKASR DLKPDFVERR QSVRVPLAPL GEDARSTNIL TPLVFTTEEL EPRAQFPTWQ 
QHVAPLYDVR MPDGVNAEDG FAVTQKVWDL RGMLLIEQTV PPFSYERTAE KVRFSPIDHW
QISFLRSGRT WTAVDDRVAE NEPGMINIRS FGYPFRGRAL ATDVVLLIIP VDHFAGLGGM
PEACNNATLG GYRAKLLIDF VSTIQAGLDH IRSEDLPELR DALRQIVFDT IAPLVKENDA
SEHNASLGAS LGLMTKARRF IQKNLTSREL TPDALSKELA ISRTHLYQLF EGSGGVLNYI
RQKRLLAAHE MLADASENRR VSDIAQLFGF DTAANFTRAF TQHFGYSPSN VRKSLSRNDG
VSDSQSDANR SLTFSTLLRT LATTGA