Gene Oant_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4309 
Symbol 
ID5381481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1735292 
End bp1735792 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID640836998 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001372838 
Protein GI153011624 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCGA TATCCGAGTT CGAAGAAGAG TTGCTGGCAC TTGGACCTGC GCTTCATCAG 
TTCGCCAGAA CGATGTACCA CCAGCGTTCC GACGTAGAGG ATCTTGTTCA GGAAACGCTA
TTAAAAGCTC TGTGCAATCG CGATAAGTTC GTCCCCTATG GATCGCTCAA ATCCTGGCTG
TTCACGATCA TGAAGAACAC ATTCTGCACC AGGATCAAGA GATCCCGCCG CGAAGATGCA
ATTGAGGATT GGGAGGGACC GACAATCAAC CCATCACAGG ATTGGGCCAT GGAATTGCAG
GATGTCGGGG AGGCTTTCTG TAAACTGTCG CCGGCATATA AGAGCGTTCT TGACCTAGTG
ATATTTCGCG GGCTGAGTTA CGAAAAGGCT GCGATGGCGG CAGGCTGCAC GGTCGGAACG
ATCAAGAGCA GGCTTAACAG AGCAAGAGCG CAACTCGAAA GCGACTTGTA TCCGGCTGAA
AAGAGTCTTC GGAAACGATA G
 
Protein sequence
MPSISEFEEE LLALGPALHQ FARTMYHQRS DVEDLVQETL LKALCNRDKF VPYGSLKSWL 
FTIMKNTFCT RIKRSRREDA IEDWEGPTIN PSQDWAMELQ DVGEAFCKLS PAYKSVLDLV
IFRGLSYEKA AMAAGCTVGT IKSRLNRARA QLESDLYPAE KSLRKR