| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4117 |
|---|
| Symbol | |
|---|
| ID | 5381645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 1548270 |
|---|
| End bp | 1549307 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640836801 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) |
|---|
| Protein accession | YP_001372648 |
|---|
| Protein GI | 153011434 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.314737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAAG CCAAAAAAGT CGAACCGCAG GATACGGGCG ACCGTCACAA TTTGCCTTAT
GCTTTCCGCA CTTATTCGCC GGAACAGCTG AAGGAAGCAC TGCATAAAAT GTATCTTATC
CGCCGCTTTG AAGAAGGCGC GGAAGAAAGC TACACGCGTG GCCTTATTCA CGGAACGATG
CATCTTTCTA TCGGGCAGGA AGCGAGTGCG ATGGGATCGT GCCTGCCGCT CAACGACGAT
GACATGATTA CGTCGACCCA TCGCGGCCAC GGTCATTGCA TCGCCAAAGG TGCAGACGTG
AAGCGCATGT TTGCGGAGTT TTTCGGCAAG GAAACCGGCT ATTGCAAAGG CCGTGGCGGC
TCGATGCACA TTGCCGATGT TTCCAAGGGA AATCTCGGTG CGAACGGTAT TGTCGGCGGA
GGTATCCCGA TTGCGGTAGG TGCAGCTCTT TCTGCAAAGA AGCAGAAAAA CGGCAAGGTG
GTCGTTTCGT TCTTTGGCGA TGGTGCGAAC AATGAGGGTG CTTTTCACGA AGCACTCAAT
ATGGCCGCGG TCTGGAAGTT ACCGGTCGTT TTCATCTGCG AAAACAATGG CTACGGCATG
TCCACCTCGA CCAAGCGCTC TACGGCAGTT GCCAATGTTG CTGACCGCGC CTCGGCCTAT
AACATGCCGG GCGTGATCGT GGATGGCAAC AATCTGTCGG AAGTGGCAGA GGCCGTGAAC
GAAGCCACCG AACGCGCACG GCGCGGCGAT GGGCCTACGC TCATTGAAAA CAAAACATAC
CGCATTCGTG GTCATTCCAA GAGCGATCGC AACCGCTATC GCACCAAGGA AGAAATTGAG
CATTGGCAGC ATGATCGCGA TCCAATCGCG CATTTTGAGG CCGACTTGAA AGCCTATGGC
TTCATCAATG ACGCCGAGAT CGAGGCAATT CGTGCTGAGG TGGAAAAGGA AATCGCTGAC
GCGATTGAGT TTGCCAAGAA CAGCCCCGTG CCTGATCTGA CCAACCTGAC CCGCGACGTT
TACACGGACG ATATTTGA
|
|---|
| Protein sequence | MVQAKKVEPQ DTGDRHNLPY AFRTYSPEQL KEALHKMYLI RRFEEGAEES YTRGLIHGTM
HLSIGQEASA MGSCLPLNDD DMITSTHRGH GHCIAKGADV KRMFAEFFGK ETGYCKGRGG
SMHIADVSKG NLGANGIVGG GIPIAVGAAL SAKKQKNGKV VVSFFGDGAN NEGAFHEALN
MAAVWKLPVV FICENNGYGM STSTKRSTAV ANVADRASAY NMPGVIVDGN NLSEVAEAVN
EATERARRGD GPTLIENKTY RIRGHSKSDR NRYRTKEEIE HWQHDRDPIA HFEADLKAYG
FINDAEIEAI RAEVEKEIAD AIEFAKNSPV PDLTNLTRDV YTDDI
|
|---|
| |