| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4100 |
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| Symbol | |
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| ID | 5382891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 1531286 |
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| End bp | 1533391 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836784 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001372631 |
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| Protein GI | 153011417 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.102466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA GCGAGAACAG CGCCGTAGAA TCGGCCGAGC ATATTCCCGC CTGGGGCACA
GGCACAGGCG CAAAAGTCCT GTTTGCCATC GCCGTGGCTT TTTCGGTTTT CCAGCTTTGG
ACTTCCGCTT ATTCACCACT GCCAAGTCAG GTGGTCCGCT CCGTCCATGT CGGATTTCTG
CTTCTGCTTC TCTTCGGCCT TTACGCCAAT GCGAGCACAG TCGCTGCAAA GCGAGCGGCC
TTCTGGCTGG CGGCCATCGT TGCTTTCGTG CTCAGTCTTT ATCATTGGGT TTTCTACGAA
GACCTGGTGA TCCGGGCTGG CGAACCCAAC ACGCCGGATA TCATAATCGG CATTCTCGTG
GTCGCTCTCG TCTTCTGGGC GGGAAAAAAG ATGATGGGTT GGACCTTACC TCTCATCTGC
GCGATCTTTC TGGCTTACGG CTTGTTCGGA CAATATCTCC CGCACCCGTT CAACCATCGC
GGATATGATT TCGAGCAAGT GGTCGAAGTT CTCTTTCTGG GAACAGAAGG AATTTACGGC
ACGCCGATTT ATGTCTCATC GAGCTATATT TTTCTTTTCA TCCTGTTCGG CGCATTTCTC
GAACGCGCGG GCATGATCCA ACTCTTCAAT GACATTGCCA TGGGAACGGT TGGCGCGTCG
CGTGGCGGCC CTGCAAAAGT TTCGGTGATT TCGTCGGCCT TGATGGGAAC GATCAACGGT
TCCGGTGTCG CCAATGTTGT GACCACAGGC GCTTTCACCA TTCCGCTCAT GAAGCGCTCC
GGTTTCCGCC CGGCATTCGC GGGTGGTGTC GAAGCCGTTG CGTCTATGGG TGGCCAGATC
ATGCCCCCGG TCATGGGGGC GGTTGCTTTC ATCATGGCTG AAACGCTGGG TCTGCCTTAT
GTTGAGATCG TCAAAGCGGC AATCGTGCCT GCTATTCTCT ACTTCATAAC TGTCTTCGTG
ATGGTTGACC TTGAGGCGCG TCGCCTCAAG ATGAAAGGCC TCAATAAAAG CGAAATGCCA
AGCGCTCTCG AAGCAATCAG AAAACGCTGG TTTCTGGTGC TGCCGCTCGT CGCATTGGTG
TGGCTCCTTT TCTCCGGCTA TACGCCACTT TTTGCAGGCA CTGTCGGCCT CAGTCTGACC
GCGCTCATCA TTCTCGGCGT GCCGGTTTCC GGCTCGATGT CGATGCCTTT GCGTGTGCTG
TTCTGGGTCG CGCTTGGCGT CATGTCAGCA GCAGCTTTCG GCACGACCTT CAACATTTTC
GGCTATGCCC TGCGCGGTAT TACGCTGATC ATCGCCCTCG TTGTGCTGCT GGTCATGATA
AATTTTCTGG TGCGCGGTGG TCGGGAAACG CTCGGTCTGT GTCTTCAGAG CCTCGGGGAA
GGTGCCAAGA ATGCGCTGCC CGTGGGCGTT GCCTGCGCGC TGGTTGGCAT CATCATTGGC
ATTCTGGCGC TTACCGGAGC CGGTTCGACA TTCGCTCGTG TGATTGTCAG CGTTGGAGAA
AACTCGCTGT TCTTTTCGCT GGTGCTGACC ATGCTGGCCT GTCTTGTGCT TGGCATGGGT
ATTCCGACTA TCCCAAACTA CATCATCACA TCCTCGATCG CTGGCCCAGC ACTCCTTCAC
CTGGAAGTGC CGCTTCTGGT ATCGCACATG TTCGTCTTCT ATTTCGGTAT CATGGCTGAT
CTCACGCCGC CTGTTGCGCT TGCGGCTTTT GCGGCAGCGC CAATCGCGCG CGAGTCCGGC
ATGAAGATCG GCATGCAGGC GATCCGTATT GCGGTTGCGG GTTTTGCCGT GCCTTTCATG
GCGGTGTACG AGCCGGTCAT CATGCTTCAG GAAGGGGGGC CTCTTTCGGA AACGCTCGGG
TTCTGGCCTG CATTCGCCTA TATGTTCGTC AAGGCACTAC TCAGTATTTT ACTTTGGGGC
GCAGCTGCTA TCGGCCATCT TCGAACGCCG TTGAACATGT GGGAACGCAT ATGGGCTTTC
GTCGCTATCG CGCTGATGCT CGCAACCTAT CCCTATAGCG ATGAACTCGG TTTTGCTGCC
TGTGCAGCTT TCCTTGCATG GCATTTCTGG AGATCGCGAC CGTCCGTCGT CGCGTCATCC
GGTTGA
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| Protein sequence | MTQSENSAVE SAEHIPAWGT GTGAKVLFAI AVAFSVFQLW TSAYSPLPSQ VVRSVHVGFL
LLLLFGLYAN ASTVAAKRAA FWLAAIVAFV LSLYHWVFYE DLVIRAGEPN TPDIIIGILV
VALVFWAGKK MMGWTLPLIC AIFLAYGLFG QYLPHPFNHR GYDFEQVVEV LFLGTEGIYG
TPIYVSSSYI FLFILFGAFL ERAGMIQLFN DIAMGTVGAS RGGPAKVSVI SSALMGTING
SGVANVVTTG AFTIPLMKRS GFRPAFAGGV EAVASMGGQI MPPVMGAVAF IMAETLGLPY
VEIVKAAIVP AILYFITVFV MVDLEARRLK MKGLNKSEMP SALEAIRKRW FLVLPLVALV
WLLFSGYTPL FAGTVGLSLT ALIILGVPVS GSMSMPLRVL FWVALGVMSA AAFGTTFNIF
GYALRGITLI IALVVLLVMI NFLVRGGRET LGLCLQSLGE GAKNALPVGV ACALVGIIIG
ILALTGAGST FARVIVSVGE NSLFFSLVLT MLACLVLGMG IPTIPNYIIT SSIAGPALLH
LEVPLLVSHM FVFYFGIMAD LTPPVALAAF AAAPIARESG MKIGMQAIRI AVAGFAVPFM
AVYEPVIMLQ EGGPLSETLG FWPAFAYMFV KALLSILLWG AAAIGHLRTP LNMWERIWAF
VAIALMLATY PYSDELGFAA CAAFLAWHFW RSRPSVVASS G
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