Gene Oant_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4093 
Symbol 
ID5382943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1523664 
End bp1524941 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content55% 
IMG OID640836777 
ProductTRAP dicarboxylate transporter, DctM subunit 
Protein accessionYP_001372624 
Protein GI153011410 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1593] TRAP-type C4-dicarboxylate transport system, large permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTGA CCCTTCTTCT TGGCTCGTTC GTGCTGGGCC TTGCCATCGG CTTGCCCGTA 
GCTGTGACAT TGGGCCTTTC CTCGATGGCC TATCTTCTGT TCGCGGACAT CCCCTTGGTT
GTCATCCCGC AGAAAATGTA TGCCGGGATG GACAGCTTTG TTCTGCTCTG CATTCCAGGG
TTCATTCTGG CTGGTAACCT TATGAATTCC GGCGGCATTA CCGAACGGAT TATTCGCTTT
GCAAATGCCC TTGTGGGCTG GATGCGCGGC GGGCTGGCAC AGGCCAATAT CGCAGCCTCG
ATGCTTTTCG GCGGTATTTC AGGAACCGCA GTCGCAGATG TAGCTTCCGT TGGCGGCATG
ATGATCCCCG GCATGAAGAA GGTTGGTTAT CCGGCCGATT TCTCCGCTGC AGTCACAGCC
GCCTCATCGA CTGTCGGCCC GATGATCCCG CCAAGCGTGC CGATGATTAT CGTCGGATCG
CTCTCCGGCC TTTCGGTCGG CAAGTTATTT CTAGCCGGTG CGGTACCCGG CCTTCTGATG
GGTTTTGCCA TGATGGTGAC GACCTATTTC ATCGCCAAGA AGAAAAACTT CCCTCGCGAG
GACTGGAAGG GCGCCCGAGA GTTGCTGTCG TCATTCACCG GAGCGATCTG GGCTATAGCA
ATGACCGCAC TGATCGTGGG TGGCCTGCTG ATCGGCATCA CGACACCGAC CGAAACGGCA
GTGGTTGCAT GCCTTTATGC GGCGGTGGTG GGGCTGTTCG TCGATAGAGA ACTGCCGGTA
AGTCGGATTC CGAAAATCAT CATTGATAGT GCAATCAGTT CGGCAGGCAT TCTCGTACTG
GTGGGCACAG CCAATGTGTT CGGCTGGATT CTCGTCGCCG AACGTATTCC GCAGACATTG
GCCAATGCGG TTCTCTCCAT CACCGATAAC AAGTTTCTCG TTATCCTGCT GATCAACATT
CTGCTTCTGT TCGTCGGCAT GTTCATGGAA ACGATTGCAG CCCTGATCAT TCTATTCGTA
CCATTGCAGG CTCTAGCCTT GGCAGTCGGT ATCGACCCCA TTCATTTTGC GTGTTTTGCG
GTCCTGAACC TTATGATCGG CCTGACTACA CCACCGGTCG GCGTTTGCCT GTTTGTCGCG
TCCAATATTG CGCGTCTCCC ACTCTCGCCG GTGATCAGGG CGATCATTCC CTATATCATC
ACCAATCTGA TTGTCCTTTT GATGGTCAGC TACATGCCGC CTCTGGCGAC CTGGCTGCCC
AACACGCTGA TGCCGTGA
 
Protein sequence
MGLTLLLGSF VLGLAIGLPV AVTLGLSSMA YLLFADIPLV VIPQKMYAGM DSFVLLCIPG 
FILAGNLMNS GGITERIIRF ANALVGWMRG GLAQANIAAS MLFGGISGTA VADVASVGGM
MIPGMKKVGY PADFSAAVTA ASSTVGPMIP PSVPMIIVGS LSGLSVGKLF LAGAVPGLLM
GFAMMVTTYF IAKKKNFPRE DWKGARELLS SFTGAIWAIA MTALIVGGLL IGITTPTETA
VVACLYAAVV GLFVDRELPV SRIPKIIIDS AISSAGILVL VGTANVFGWI LVAERIPQTL
ANAVLSITDN KFLVILLINI LLLFVGMFME TIAALIILFV PLQALALAVG IDPIHFACFA
VLNLMIGLTT PPVGVCLFVA SNIARLPLSP VIRAIIPYII TNLIVLLMVS YMPPLATWLP
NTLMP