Gene Oant_4043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4043 
Symbol 
ID5381728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand+ 
Start bp1469291 
End bp1470304 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID640836728 
Productputative mRNA 3-end processing factor 
Protein accessionYP_001372576 
Protein GI153011362 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCA ACCAGCTTCT CTGCTCCTCT CCCAAAGGCC TTTATTGCCC GCCCGGCGAT 
TTCTACATCG ACCCCGTGCG TCCAGTGGAA CGCGCGCTCA TAACCCACGG GCATTCCGAT 
CACGCTCGCT CGGGCCACAC CCATGTGCTG GCAACGCCCG AAACGCTCGA CATCATGGCG 
CTACGCTACG GCGCGAACTT CGCCGAAACC ACACAACCGA TTGGCCTCGG TGAAACCCTG 
ACGATCAACG GTGTTCGGGT CCGTTTTCAT GGCGCGGGCC ATGTGCTCGG CTCGGCCCAG 
ATCGCGGTGG AAAAAGATGG AACCCGCATT GTCGCTTCGG GCGATTACAA GCGCGCAGTC 
GATCCAACCT GCGCGCCTTT TGAGCCGGTC GCCTGTGATG TCTTCATCAC CGAAGCAACC 
TTTGCGCTGC CGGTGTTCCG TCACCCTGAT GCGTCACACG AGATCGCGAC GCTTCTCAAA 
TCAATCCGGC AATTTCCTGA ACGCGCACAT CTTGTCGGCG CCTATTCACT GGGAAAGGCA 
CAGCGGGTTA TCAAACTCAT ACGCAATGCA GGCTACTCGA AACCGATCTA TATTCACGGT 
GCACTGGAAA AGATCTGCGA TTATTACCAG GCACAAGGTA TCGATCTCGG TCCGCTCGAA 
CCGGCAACCG TGGAGCGTGA CGAGGCGCAG CCGGATTTTA CAGGCAAGAT CATCGTCGGT 
CCTCCATCGG CTTTTTCCGA CCGTTGGGCG CGGCGTTTTC CCGATCCCAT TTCAGCCTTC 
GCCTCCGGCT GGATGCGCAT CCGCCAGCGC GCCAAACAAC AGGGCGTGGA ACTGCCACTC 
ATCATTTCCG ACCATTGCGA CTGGGATGAA CTGACGGCGA CAATTACGGA AATTGCACCC 
GCCGAAGTAT GGGTCACACA TGGGCGCGAG GAAGCGCTCG TTCGCTGGTG CGAACTGCAG 
AACATACCAG CCAAGCCGCT GCATCTCGTC GGCTATGAAG ATGAGGGCGA TTGA
 
Protein sequence
MRFNQLLCSS PKGLYCPPGD FYIDPVRPVE RALITHGHSD HARSGHTHVL ATPETLDIMA 
LRYGANFAET TQPIGLGETL TINGVRVRFH GAGHVLGSAQ IAVEKDGTRI VASGDYKRAV 
DPTCAPFEPV ACDVFITEAT FALPVFRHPD ASHEIATLLK SIRQFPERAH LVGAYSLGKA 
QRVIKLIRNA GYSKPIYIHG ALEKICDYYQ AQGIDLGPLE PATVERDEAQ PDFTGKIIVG 
PPSAFSDRWA RRFPDPISAF ASGWMRIRQR AKQQGVELPL IISDHCDWDE LTATITEIAP 
AEVWVTHGRE EALVRWCELQ NIPAKPLHLV GYEDEGD