Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4037 |
Symbol | |
ID | 5381585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1459481 |
End bp | 1463071 |
Gene Length | 3591 bp |
Protein Length | 1196 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640836722 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001372570 |
Protein GI | 153011356 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAATC CAGATATGGC GTCAGGTTCA CGATCAATTA TTGACGATTT GAATGCCCGC CGCGAGCGCC GAGCGTCATC ACCTGCCATG GAAGAACTTA ACCGCACGCT GGCGAGCCTT GAGAAACGCC TGATGGATCT GGAGCACGAC AGCGCCCCGG ACGTGCGTGA TATTCTGCGT TCCGAACGTC ACCCAGTTCG CCATCCGGAC GAGACTGTAA CCGGCCTCGC CGAGATTGCC GAAAATCTCC GTCGGATGCG CGGTAGCCAT GAAGAGCCGC AGCCACATTA TGCCTCAAGC GCCGAGGTCA GCCGTGCCAG CCGCGAGATG ACCCGCCTTC AGCGCGCCGC AAGCGAAGAA GGCTTTTCAC AGCAGATGAG CGATGATTTC GAGCGTATCA ACGACAGTGT ACGCCTTCTC GCCGAACGCA GCAGTGAGGC AAACGCGCAG GCGCTCCGCC GCCAGCTCGA AGAGCTCAAT CGCACCGTCC AGAGCCTCGC GCGCGAAGAA ACACTGCATC GTCTCAACAA TCGTTGGGAT CGCTTCGACG CGCGTTTCGA GGCCTTCGAA CAGCGCCACA ACGCCGTCGA TCCGGCGTTG GATGCGATAG GCTCGCGACT TGAGCAGGTG CGCGACGCCA TCGGTACGTT GCCCCAGTCG AACCGCCTGA GCGCAATCGA GGATCGCATC GGCCAGCTCG CGAATTCCAT CGAGGAATCG CTCAGCCCAC AACACGCGTC GTCGCTCGAT CAGAGCCGTC TGCAGCAGAT CGATGAGCGG CTGGACGAAA TCAGCCGCGC TATCATCGCC ACCAGCCGCG CCCAGCGCCC GGATCAGGAC AGTGCGCGCC GACTGGAGCG TATCGAAAGC CGTTTGGCAG AGCTCGCAGA ACAGCTCGCC ACTTCGGCAA CGCAGCAGAA TTCCGACACG CTCTATCGCA AGCTCGGCGA ACTTTCCTCT CGCATCGACG GTCTTTCAAG CGGCTCAGCG CTACCGGAAG GCGTCATCGA CCAGCTCGCA CACCAGATTA ACCTGCTTGC CAATCAGGTT GGCAAGGTCA TGGAGAATCT GAACCAGTCC GACTATCACG TTGTAGAGGC ACGTCTTGAA GCCATCGGCG AGAAGCTCGA AGCTGCCGAG CGCCGGGTAG AGGAGCCGCA TCCTTCCGTT CTGGACAAAA TCGACCGCCG CTTTGCAGAA CTGACCGAGC GTCTCGACGC GCAATATGCC ACGCAGCATG TCGACAACAG CGCGATCCAC ACTCTGGAAG GCCGCCTCGA CGATCTTTCG CAGCAGATTT CACTGGGTCT GCTTCAGGCG CCGACCTATG ACGGCCCTGG ACTGGATGTG AAGGCAATCC GCAGCCTCGA AGATCAGATT GCAAATATCG CCCATCATCT TGCGCAGCCC GTTGCCGAGA TCGCAGAATT GAAGCCGCGT CTCGATTCCA TCGAGCGCTC CATCGCCTCC AATCGCGAAA CAGTGCTGGA TGCAGCGCGC GAAGCTGCCG AAAGTGCTGT CGCGCGCGTT CTGCAGCATG GATCACATGG CGACAGCGTG ATCGCCCGGC AACTCGCCGA AGACATGAAA TCGCTCGAGG CCCTAGCGCG CAATTCCGAC GAGCGCAACG GCAAGACATT CGAGACCGTC CACGACACAT TGGTCAAGAT CGTTGATCGT CTGGCCAGGC TTGAGCAGGA CGTGGCAGGC AAATCAGACA CGTCGGACAC TGAAAAACCG GCCTTCACCA GCCCCAACGC TGGATCGCCG CGTCCGTCGG CACCGCGTTC CCCGGCTGCA GCGGCAGCGG AAGCAGCTTT TGCAACCGTC CAGAGCGAAG CCGGTCCCGC CGATATGCAG GCAGGTGACT TGACCGGGAA GTCATCGCTC TTCGGAGGTT TCGCGAAAGC TATACGCGGT CGCCGCGCCG ACAAATCCGT CGGAAAGAAC GACGAAACAC TCGAAGCCAG CGCTTTTGAC GCGACGCTTG ATGCGCCAGC CTTCGAAAGC GATCTTGCGG CCATCGAGCC GATCACACGC GAAGAACCGG AGCTGGAAAC GACTCCATCC CCTCGCCCTC AGGGCGAAGG CATGCCGGAC CTCAATTCGA TTATGAAGCG GGTGCGCGAA GAACGCCGTC AGCGCGAAGA CGCTGCCGAT CTGGCCCTTG CCGCCAACGG CAAGGTGGAC TTCATCACGG CAGCGCGGCG CGCCGCCCAG CTTGCGGCCG CAGAATCCGA ACAGCTTCAG AAGGGCGCGA CCAAGCGCAC CGGTAAGAAA AAGTCATCAG TCGGCGACAT GATCCAGCGC CAGCGCAAGC CGATCCTGAT GGCAATCGGT GCTGTGATGA TCGCGATGGC TGGCCTGCAG ATCGGCTCAG CTTTCCTCAA CCGCGACGAG CCGGTGGAAA CGGCAATCGA TACAGTACCG CCGCAGATCG ACACCACTGC CACCGACAAC ACGCCTGCGC CAGCCGACGA AATCGCTGCA AAAATCGCGT CGGAAACGGC ACCTGCGCTC GAGCCGTCCG CCCCCGCAAC AGTGCCTCCG GTTACGGAGC CGCGCTCGGA GAAAGTTGCG CAGGAAGAAA TCCCGGAACC AGCAAACGAG CAGCAGGCAG CGGTGGAAAT ACCGACAGAG GTTGAACAGC CTGCCGCAAC AATCGCCAAT CCGGTGAAGC CTGTTGAAAC GGCGGCATCG GCCGAACCTG CCGCAAAGCC TCAGGCGGCC ATTCCGCCTG TACCGGAAGA AGCCGGTCCG GCAGCGCTTC GCGAGGCTGC GGCCAAGGGC GATGCTCGTG CGCTCTTCGA GGTCGGCAAT CGCTATATGG AAGGTCGCGG CGTTGCCGCC GACTTTGCCA AGGCGGCGAA ATGGTATGAG ATTTCTGCAG GTCAAGGCTT TGCCCCGGCG CAATATCGTC TCGGCAACTT CAACGAGAAG GGCCTTGGCA TGGCCCGCGA TCTCGAAAAG GCCAAGACCT GGTACCAGCT TTCAGCGCAG CAGGGTAACG CCAGCGCGAT GCACAACCTC GCCGTCCTTT TCGCAACCGG CGCCAATGGC AACCCTGACA ATGCTTCCGC CGTGCGCTGG TTCACCGATG CCGCCGAACT CGGCGTGAAG GACAGCCAGT TCAATCTCGG AATCCTTGCG GCCAAGGGAC TGGGCATGCC AGTCAATCTG GAAGAAAGCT ACAAGTGGTT CTCGCTTGCC GCCAATGCTG GTGACAAGGA TGCTGCCGAC AAGCGCGACC AGATTGCCAA GGCATTGAAA CCGGAACAGC TTGAACGCGC CAAGGATTTG GTCAAGCTCT GGAAGGCCAA GCCGCTCGAT CAGGCAACCA ACTCCATCGA CGTCCCGGAT GCTTGGACCG AGAGCAAACC GCTCACCACC GGCTCGGTGG ATATGAAGAA GGCTGTTCGT AACATCCAGC TTATTCTCCA GAAGAACGGC TACGACGTCG GCACTGCCGA TGGCTTGATG GGCGGCAAGA CCCGCGCTGC AATTGCCGCC TTCCAGAAGG CGAATGGCCA GACGCCGACC GGCGACGTTG ACCAGCAACT GGTCCAGCTT CTTCTCGAGA AGAACAAGTA A
|
Protein sequence | MANPDMASGS RSIIDDLNAR RERRASSPAM EELNRTLASL EKRLMDLEHD SAPDVRDILR SERHPVRHPD ETVTGLAEIA ENLRRMRGSH EEPQPHYASS AEVSRASREM TRLQRAASEE GFSQQMSDDF ERINDSVRLL AERSSEANAQ ALRRQLEELN RTVQSLAREE TLHRLNNRWD RFDARFEAFE QRHNAVDPAL DAIGSRLEQV RDAIGTLPQS NRLSAIEDRI GQLANSIEES LSPQHASSLD QSRLQQIDER LDEISRAIIA TSRAQRPDQD SARRLERIES RLAELAEQLA TSATQQNSDT LYRKLGELSS RIDGLSSGSA LPEGVIDQLA HQINLLANQV GKVMENLNQS DYHVVEARLE AIGEKLEAAE RRVEEPHPSV LDKIDRRFAE LTERLDAQYA TQHVDNSAIH TLEGRLDDLS QQISLGLLQA PTYDGPGLDV KAIRSLEDQI ANIAHHLAQP VAEIAELKPR LDSIERSIAS NRETVLDAAR EAAESAVARV LQHGSHGDSV IARQLAEDMK SLEALARNSD ERNGKTFETV HDTLVKIVDR LARLEQDVAG KSDTSDTEKP AFTSPNAGSP RPSAPRSPAA AAAEAAFATV QSEAGPADMQ AGDLTGKSSL FGGFAKAIRG RRADKSVGKN DETLEASAFD ATLDAPAFES DLAAIEPITR EEPELETTPS PRPQGEGMPD LNSIMKRVRE ERRQREDAAD LALAANGKVD FITAARRAAQ LAAAESEQLQ KGATKRTGKK KSSVGDMIQR QRKPILMAIG AVMIAMAGLQ IGSAFLNRDE PVETAIDTVP PQIDTTATDN TPAPADEIAA KIASETAPAL EPSAPATVPP VTEPRSEKVA QEEIPEPANE QQAAVEIPTE VEQPAATIAN PVKPVETAAS AEPAAKPQAA IPPVPEEAGP AALREAAAKG DARALFEVGN RYMEGRGVAA DFAKAAKWYE ISAGQGFAPA QYRLGNFNEK GLGMARDLEK AKTWYQLSAQ QGNASAMHNL AVLFATGANG NPDNASAVRW FTDAAELGVK DSQFNLGILA AKGLGMPVNL EESYKWFSLA ANAGDKDAAD KRDQIAKALK PEQLERAKDL VKLWKAKPLD QATNSIDVPD AWTESKPLTT GSVDMKKAVR NIQLILQKNG YDVGTADGLM GGKTRAAIAA FQKANGQTPT GDVDQQLVQL LLEKNK
|
| |